| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2047 |
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| Symbol | |
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| ID | 5372261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2449867 |
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| End bp | 2453688 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830251 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001366252 |
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| Protein GI | 153000571 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.680974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC AGATTCAGTT AAACGCAGCG GCGTTACATT CAGCACCACA GGCGCTTGAT
CCACTCACAT TGCCCTTTGG CGGTAGTCGT CTGATTGAGG CCAGCGCAGG CACTGGTAAA
ACCTACACGA TTTCAGGTCT TTATTTACGC TTATTGCTTG GTGATGGCAT AGCAGCGCCG
CTGACCTGTG AGCAGATTCT CGTGGTTACC TTCACCAATG CGGCCACCGA AGAGCTAAGG
GATCGTATTC GTCGGCGTAT TCAAGTCGCC TTTAAGTGCT TCTTAGGGCT AACGATTGCC
GATCCCTTTG TGCAGGCGTT GTATGACAAC ACCCCAGAGA GTGAACGCGC TATTGCCCTG
CGGCGATTCG ATCTCGCCCT TAAATCCCTC GATGAAGCGG CAATTTTTAC CATTCACGGT
TTCTGTCAGC GAATTTTATC GGATCTCGCC TTTGAGTCTT CCTTGCTGTT CGAATCGGAC
TTTACTTTGG ACGACAGCGA ATTTTTGCAC CATGCGGTGC GGGATTTTTG GCGTGAGGCC
TGTTATCCGC TGCCCGATTA CTTAGCGCAA ATCATTGCTA AGGAATTTGG CGAGCCCGAT
GGTTTGGTCA AACAATTGCG GCCGCTCCTT GGCGCCAGTC AAGCAAAGCC TCTGAAACCC
GCGCTTAAGT TTGATGCCTT GGCCCTATCA CTGCGCCAAA GTTTAGAGCG CTTTAAATTA
GCTTGGCCGC GGGGACGCGA TGGCTTATTG GCATTGCTAC ACGGTTTGCC GCTGAACGGC
ACCCGCTTTG GCAAGGCAAC GGATAAGTAC CCCAAACTCG CCGCCATGTT CGATGCGCTG
GATAACTGGC TCGCCTTCGG TCATGGGTTG CCGCCACTGA AAGAGTTAGA AGCCTTGTCC
TTGTCTGAGT TAAAGCTCAA CAAGGGCGGC GTGATCCCAA GTGTGAGCGA AGCACCGCTG
ATGGATCATA TGGAGCAACT TGCCACATTG ATTGCCGCCA TTAAACCGGC GTTTTTGTAT
AGTGCGAAAC TTGGTATAAG CGAGCGATTT GCCCAGCAAA AGCAGCAAAA AAACGTGCTG
ACTCCAGATG ATTTGCTCAC GACATTAGCA AGCGCGCTAC ATGCCAATAA TGAAACCTTG
CCCAAAGCCG TGGCAACACG TTTCCCCGTC GCGCTTATCG ATGAATTCCA AGATACCGAT
CCACTGCAAT TTGCGATCTT CTCTGGCATC TACCAAGGCC GCTACTCGTT TGAGCAGCAA
GGTGTAGATA CTACAGAGAA CAAGCTCAGC CTGTTGATGA TTGGCGATCC TAAACAAGCC
ATTTATGCCT TTCGCGGCGC CGATATCCAT ACCTATATTG AGGCCCGTCA TCATACGCAG
GCCCACTATC ATCTGGATAC CAACTACCGC TCAAGCGCAA ACATGGTCGC TGGAGTTAAC
CATCTGTTTA GCCAGCATAA TGATCCTTTT ATCAGTCAAT CGATCCCCTT TGATAGCGTG
AAAACGCCCA GCAGTGCCAA GGGGAAAACC CTCACTGAAA AAACAGCTAA TCCTGCTGCC
TTAAGACTAA GACTCTTAAG CGAAAGCGCA GAAAACGGCC TCAACAAAAC CACCGCCAGA
CACTTGCTCG CCGAAGATGC AGCAGCGGAG ATCACCCGTT TACTGACAGA TGCGGCCAAT
GGCGAATGCC ACAGCCCGAA AGGAGCTTTG ATCGCTAAAG ACATCGCTAT CTTAGTGCGG
GATCGCAACG AAGCGGCGGT GATGAAAACC GCATTGAGTA AACGTCATAT AGGCGCAGTG
TTTTTAAGTC GTGACAGTGT GTTCGATACC CTTGAAGCGC GGGAAATGGC GTTAATTTTA
CGATCTCTGG CGAATCCTAA GGATGAACGG GCATTGCGCA GCGCCCTAGC CACGGCATTA
TTGGGCTACA GCGCCGAGCA AATTCATGCC TTCAACCAAG ATGAAGAGCA CAGACAGCTG
TTATTAGAGC AGTTTTTTAA CTTGCACCAA GTGTGGCAAA AACGCGGCAT CATGCCCGCG
CTATTAAGCC TTGCCAATAG CACTAAGCTG ATTGACCGTT TACTGCACTC CGCTAGTACG
CAAACCGATG CACAGGAGCA AGATGCCACG AATGGCGAGC GCCGTTTGAC GGATTTTCGT
CACCTTGCCG AGCTATTACA GCAAAAGGCG ACTGAGCTTG ATGGTATTAG CGCCCTGCTC
AATTGGTATG AACAGCAACT GATTGATAAC ACGGGAACCG ATGAACAGCA GCTGCGCCTT
GAGAGCGAGC AGAATCTGGT GCAGATCGTT ACTATCCATA AGAGTAAGGG CCTTGAGTAC
CCCGTGTGTT TTGTGCCCTT TGTCAGCCTA GCCCGCGACA ATCGCCGCCG CCCGACGCCT
ATGCTGTACC ACAGAACCAA CGACGCAGGT GAGCAAGAGC TAGTATGGGA TATCGAAGGC
ACGGATGAGG GTTGGGAGCG CGCCAAACAA GAAACCTTGG CCGAAGACTT GCGCTTGCTA
TATGTGGCGC TCACTCGCCC TGTGTATTTG TGTTACTTGT ATATCGCCAA TCACAGTCGT
CAACTTAAAA ATGGCCTTAA AAGTCAGCTG CATGAAACCG CCATCGGCTA TCTGCTCGGC
ATAGGCGACT CAGAATGTGA CTTTGCCCGT ATCTGCAATG CTGCGCAGCA GCTCGCCCAA
GATGTGGAAG CCATAAGTAT TGATAAGGTG CCCGATGACA TAGACGAGCG GCCATTGCCC
TTAAGCCAAG ACATAGCACA AATACTGAGC GCGAAAACCT TAACCCGCCA ATACAGCACG
CCATGGCGAG TCGGCAGTTA TTCAGGCCTA GTTAAAAATA CCAGCCATGG TAAAGCCGCT
CCGGGCGCCG ATGATGAAAC ATTAGGCACA CTTGAATATA TGGCTGCGCA AACACTCTCT
ATTCCTGATG AGCCAAGTCA TGAGCTGCAG GATGGCATGC TCAATCGATT TAACTTTGAG
CGCGGTGCTA ACGCAGGTAG TTTTATGCAC TTAGTGCTAG AAGAGATTGA TTTTACGCAG
GCAGACAGAG ACTTACCGCT ACAACTGCCT AAAGCTATGC TGAAATACGG TATCGCACCC
GAGTGGCAAA CGGTATTGCA CACTTGGTAT CTGGATGTGC TGCACGCGCC GCTTGGGCTC
ATGCCGACAA CAATGTCATC AACAACAGTG CCAACGACAA TGCCTTCAAC ATCGGCCTTC
GAGAATAATT CCAAGACGGC CAAACCTGAA CATCCAGGAC TATGCTTAGC CAAGTTATCG
CCGCAGGATA CCTTGGTCGA AATGGAGTTT TATTTACCCC TAAGTGAACT TAAGGATACT
GAGCTCAATG CGCTACTGCA GCAGTTTGGC TATGAATCAA CACTTAAGTT TGATGATCTC
AAGGGCATGC TCAAAGGCTT TATCGATTTA ACCTTTGAAT ACCAAGGAAA ATATTATATC
GCCGACTATA AGTCGAATCA TTTAGGCGAC AACATCAATG CCTATCATCA GAGCGCGCTG
CAAAGTGCCA TAACCGATCA TAGGTACGAT TTGCAGTACA TCCTCTACTC ATTGGCGCTG
CACAGATATT TGAGTTTACG CCTGCCAAGT TATGACTACG ACAGCCACAT CGGCGGTTGT
TATTACTTGT TCTTACGGGG TATGTCGGCT CAATATCCCG GCTATGGTAT TTACTACGAC
AAGCCGCCGA AGGCACTTAT TCTCGCGCTG GATTCACTTT TTAATGACAA TTTATTTCAC
AGCGGATTAG CTGGTGCAAT CGATACAGGA GTCACGGCAT GA
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| Protein sequence | MSEQIQLNAA ALHSAPQALD PLTLPFGGSR LIEASAGTGK TYTISGLYLR LLLGDGIAAP
LTCEQILVVT FTNAATEELR DRIRRRIQVA FKCFLGLTIA DPFVQALYDN TPESERAIAL
RRFDLALKSL DEAAIFTIHG FCQRILSDLA FESSLLFESD FTLDDSEFLH HAVRDFWREA
CYPLPDYLAQ IIAKEFGEPD GLVKQLRPLL GASQAKPLKP ALKFDALALS LRQSLERFKL
AWPRGRDGLL ALLHGLPLNG TRFGKATDKY PKLAAMFDAL DNWLAFGHGL PPLKELEALS
LSELKLNKGG VIPSVSEAPL MDHMEQLATL IAAIKPAFLY SAKLGISERF AQQKQQKNVL
TPDDLLTTLA SALHANNETL PKAVATRFPV ALIDEFQDTD PLQFAIFSGI YQGRYSFEQQ
GVDTTENKLS LLMIGDPKQA IYAFRGADIH TYIEARHHTQ AHYHLDTNYR SSANMVAGVN
HLFSQHNDPF ISQSIPFDSV KTPSSAKGKT LTEKTANPAA LRLRLLSESA ENGLNKTTAR
HLLAEDAAAE ITRLLTDAAN GECHSPKGAL IAKDIAILVR DRNEAAVMKT ALSKRHIGAV
FLSRDSVFDT LEAREMALIL RSLANPKDER ALRSALATAL LGYSAEQIHA FNQDEEHRQL
LLEQFFNLHQ VWQKRGIMPA LLSLANSTKL IDRLLHSAST QTDAQEQDAT NGERRLTDFR
HLAELLQQKA TELDGISALL NWYEQQLIDN TGTDEQQLRL ESEQNLVQIV TIHKSKGLEY
PVCFVPFVSL ARDNRRRPTP MLYHRTNDAG EQELVWDIEG TDEGWERAKQ ETLAEDLRLL
YVALTRPVYL CYLYIANHSR QLKNGLKSQL HETAIGYLLG IGDSECDFAR ICNAAQQLAQ
DVEAISIDKV PDDIDERPLP LSQDIAQILS AKTLTRQYST PWRVGSYSGL VKNTSHGKAA
PGADDETLGT LEYMAAQTLS IPDEPSHELQ DGMLNRFNFE RGANAGSFMH LVLEEIDFTQ
ADRDLPLQLP KAMLKYGIAP EWQTVLHTWY LDVLHAPLGL MPTTMSSTTV PTTMPSTSAF
ENNSKTAKPE HPGLCLAKLS PQDTLVEMEF YLPLSELKDT ELNALLQQFG YESTLKFDDL
KGMLKGFIDL TFEYQGKYYI ADYKSNHLGD NINAYHQSAL QSAITDHRYD LQYILYSLAL
HRYLSLRLPS YDYDSHIGGC YYLFLRGMSA QYPGYGIYYD KPPKALILAL DSLFNDNLFH
SGLAGAIDTG VTA
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