| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2046 |
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| Symbol | |
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| ID | 5371137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2447651 |
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| End bp | 2449870 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830250 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001366251 |
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| Protein GI | 153000570 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.591294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCT CAACTCAAGG GCTAAATGCA CATTCACTCT CAGCCGCGAA ATGGATAGAA
CATGGCGCAA TCCAGCTTAC CGCACCGCTA ACAGAGCTGT TGAAACTGTG GGAGCAGGAA
CGACTGCTCA CGCCACTCGA TCGGCATTTC GCACTCGAGA TGAGTCTCTT ACATCCAAGC
GACAGCCAAC AACCCTTGTT TATGTTGCTA TGTGCGCTGT TGAGCCAGCA ATTATCTTCA
CAGCACAGCT GCCTAGTGCT CACCCATATC GTGCCGCTTA ATCCCATGGC CGAGCAAAAT
AGCCATTGTA AAATCACCTT AAGCCTAGAA GCGCTCATAG AGACTTTGCA AACCTTTGAT
GCCGTCGGCC AAGCAGGAAG CAACAAACCA CTTATTTTTG ATAATGGCAG ACTCTATCTA
CAACGTTATC ATCAATTTGA AACCTCAGTG GCCACTGCTT TAATCCGCCT ATCAGGCAGC
GTATCTAAGC ACTCTGAAGA CGCTAGCCAC CAAGAGCAAC CTCAAACCGC TAAGTTGAGG
TCGCTGTTAG ATCAACTGTT CCCTGCCAAT CTGCTCGCGC CCCATTCACT CACTACCAAT
GTACTGACTA ACAGTGAAGG CACACAAAGC ACAGCACCCA TTGATTGGCA AAAGGTCGCC
ACAGCAACCG CGCTGGGTAA AAAATTGTCG GTGATCACTG GCGGCCCAGG TACGGGCAAA
ACCACTACTG TGACTAAGCT TTTGTTATTG TTACAAATGG AGTCCATGCA GGAAATCCGT
TTAGTCGCAC CGACGGGAAA AGCGGCGGCT CGCTTAAGCG AATCGATCAA AGCCTCGAAA
GCGCGTCTGG CAAAGGAACT CAGCGCCCAT GCTGATGTTA TTGATGAAGC TCGTAATAGA
AACAACCAAG ATTTTTTAAC GGCATTGGGG CGTATTCCAG AGGAGGCATC AACCTTACAC
AGACTGCTCG GGGTGATCCC AAATTCGCCG CACTTTCGCC ATCATCAAGG TAATCCGCTT
AGGCTCGACT TATTGATCGT CGACGAAGCC TCTATGGTCG ATTTGCCCAT GATGTATAAA
TTGCTCAGCG CACTGCCCGA GCACGCCAGT TTGATTTTAC TCGGCGATCA AGACCAACTC
GCCTCGGTTG AGGCTGGCGC TGTGCTCGCC GATATTTGTG CAGGTCTTAA AATACCAGTA
GATCCCAATA ACCTTGCGCA AAACAACATA GCATCTAACA ATCCTGCTCT GTGGCAAATG
CGCTATTCCA AGGAGCAAGC CGAGCGCCTG AGCGCTCTAA CGGGTTTTGA GTTAACGCCC
TATATCAGCG ATGCCCCTAA ACTTGGCGAT AGCTTGTGTA TGCTGATGCA CAGCCACAGA
TTTAAAGGCG ATGCGGGGAT TGGGCTGCTT GCTAGCGCCG TCAATCGCGC GGATCTTCAA
GGCATATTGC AAGTATGGCA ACAGGGCCTT GCTGAATTGA ACTGGTTAGA ACACAGTATG
GTCGTAAGCC AAACCCAAGC CAAAGTGAGC GAGCCGGCTA ATAATGTGGG ACTCAATTTA
CTGCTAGAGC AAGCCTGTCA GCAATATGGC GTTTATCTCA GCGCCTTGAA TAACCATGCA
AGTAACAATG ATGTAAGTAA TAGTGATGTA GACACACGTC CAAGCACGGC TGACATCATA
GAAAGCTTTA ACCAGTACCG CATTTTATGC GCCATGCGCT CGGGCGATTA TGGGGTCGAA
GGCATTAATC AGTATGTGAC TCAAGCACTG GCCAATGCCA AGCTGATTAA ACCGCTACAG
GAGTTTTATC TGGGTCGGCC GATTATCATC CAAAGCAATG ACTATAACTT AGGCCTGTTT
AACGGTGATA TCGGATTGAT TTTGCAGGAT GAAGATAAAC CCGAACGTTT AATGGCGCAC
TTCATCAAGG CCGATGGCAG CCTGTTAAAA GTCTTGCCAG CACGTTTGCC CAGCCATGAA
ACCTGTTACG CCATGACAGT CCACAAAAGC CAAGGCAGCG AGTTTAGCCG TGTAGCCTTA
GTGCTGCCAC CTAACCCCAG CCTAGCGCAG TGGCAACTGC TGACCAAAGA GTTAATCTAC
ACCGCCATCA CCCGCGCTAA AGTGCATTTT ACCTGCTTAG GCACCCAACA CGTATTCGAG
CGGGCCAGCA GCCAAGCGAC TCAGCGTGCA TCGGGTCTTG CAGACAGGCT TTGGGGTTAA
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| Protein sequence | MMRSTQGLNA HSLSAAKWIE HGAIQLTAPL TELLKLWEQE RLLTPLDRHF ALEMSLLHPS
DSQQPLFMLL CALLSQQLSS QHSCLVLTHI VPLNPMAEQN SHCKITLSLE ALIETLQTFD
AVGQAGSNKP LIFDNGRLYL QRYHQFETSV ATALIRLSGS VSKHSEDASH QEQPQTAKLR
SLLDQLFPAN LLAPHSLTTN VLTNSEGTQS TAPIDWQKVA TATALGKKLS VITGGPGTGK
TTTVTKLLLL LQMESMQEIR LVAPTGKAAA RLSESIKASK ARLAKELSAH ADVIDEARNR
NNQDFLTALG RIPEEASTLH RLLGVIPNSP HFRHHQGNPL RLDLLIVDEA SMVDLPMMYK
LLSALPEHAS LILLGDQDQL ASVEAGAVLA DICAGLKIPV DPNNLAQNNI ASNNPALWQM
RYSKEQAERL SALTGFELTP YISDAPKLGD SLCMLMHSHR FKGDAGIGLL ASAVNRADLQ
GILQVWQQGL AELNWLEHSM VVSQTQAKVS EPANNVGLNL LLEQACQQYG VYLSALNNHA
SNNDVSNSDV DTRPSTADII ESFNQYRILC AMRSGDYGVE GINQYVTQAL ANAKLIKPLQ
EFYLGRPIII QSNDYNLGLF NGDIGLILQD EDKPERLMAH FIKADGSLLK VLPARLPSHE
TCYAMTVHKS QGSEFSRVAL VLPPNPSLAQ WQLLTKELIY TAITRAKVHF TCLGTQHVFE
RASSQATQRA SGLADRLWG
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