| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2040 |
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| Symbol | |
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| ID | 5371231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2439506 |
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| End bp | 2440777 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830244 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_001366245 |
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| Protein GI | 153000564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.441952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCAT CAATTAATAC CGGTAGCTAC ACGAGCAGCA CTGGCGAAAA TGGGTCGGGC
AGTTATCGTT TTGCCTTGAT CTCATTGACT TCACTGTTTT TTATGTGGGG TTTTATCACT
TGCTTGAACG ATATTCTGAT CCCGCATCTT AAAGCGGTGT TTTCGCTGAA TTACACTCAA
GCCATGTTGA TCCAATTTTG TTTCTTCGGT GCTTACTTCT TAGTGTCGAT CCCCGCCGGT
AACTTAGTGA AAAAGCTGGG TTATCAAAAG GGGATTGTTA CCGGTCTTGT GATTGCGAGT
ATTGGCTGTG CGCTGTTTTA TCCAGCGGCC ACGCTAGCGA CCTATAATCT GTTTCTTGGC
GCGTTATTCG TTTTAGCATC GGGCATCACT ATCCTACAAG TGGCAGCCAA CCCCTATGTT
AACGCCTTAG GCAGTAGCGA AACTGCCTCG AGTCGTTTAA ATTTAACGCA AGCTTTCAAT
GCATTAGGTA CAACAGTCGC ACCATTCTTT GGTGCCATGT TAATTCTTTC TGTCGCCAGT
TCTGTATCAA GCGATTTAGC CCACGCGAGC GCTGAAGCCG AAGTGGTAAA ACTGCCATAC
CTGCTACTTT CTGGCGCCTT GGCTATCTTA GCGCTGATTT TTGCGAAGTT AGATTTACCT
GTGATCCGCG AGCATGATGA AAGTGTTCAA GGTGAAGTCC AAACCCATCT AGGTAAAACC
AGTGCCTTGC AAAGCAAGCA CTTAGTGCTC GGCGCTGTGG GTATTTTCGT GTATGTCGGT
GCAGAAGTGT CTATCGGTAG CTTCTTGGTC AGCTTCTTAG GTGAAAGCCA TATTGCCGGT
ATGCCAGAAG CTGAAGCCGC CCATTACATC GCCTATTATT GGGGCGGCGC TATGGTGGGA
CGTTTTATTG GCTCTGTGGT CATGCAAAAA GTGCCTGCTG GCTCAGTGCT TGCGTTTAAT
GCCTTTATGG CGGCGCTACT TGTGGTTGTG GCGATGACCA CCAGTGGCAG CCTTGCTATG
TGGGCAATCC TTGGAGTGGG GTTATTTAAC TCGATTATGT TCCCAACGAT CTTCAGCCTA
GCGCTGCGTG ATTTAGGTCC ACACACTTCA CAGGGCAGTG GCATTCTGTG TCTGGCAATT
GTGGGTGGGG CGATTCTACC CTTATTCCAA GGCATGCTAG CGGATAACCT TGGCGTGCAA
CTCGCCTTTA TTCTGCCCGT GATTTGTTAT GGCTTTATCC TGTTCTACGG CTCTAAGGGC
TCAAAAATGT AA
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| Protein sequence | MASSINTGSY TSSTGENGSG SYRFALISLT SLFFMWGFIT CLNDILIPHL KAVFSLNYTQ
AMLIQFCFFG AYFLVSIPAG NLVKKLGYQK GIVTGLVIAS IGCALFYPAA TLATYNLFLG
ALFVLASGIT ILQVAANPYV NALGSSETAS SRLNLTQAFN ALGTTVAPFF GAMLILSVAS
SVSSDLAHAS AEAEVVKLPY LLLSGALAIL ALIFAKLDLP VIREHDESVQ GEVQTHLGKT
SALQSKHLVL GAVGIFVYVG AEVSIGSFLV SFLGESHIAG MPEAEAAHYI AYYWGGAMVG
RFIGSVVMQK VPAGSVLAFN AFMAALLVVV AMTTSGSLAM WAILGVGLFN SIMFPTIFSL
ALRDLGPHTS QGSGILCLAI VGGAILPLFQ GMLADNLGVQ LAFILPVICY GFILFYGSKG
SKM
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