| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2039 |
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| Symbol | |
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| ID | 5371230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2437750 |
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| End bp | 2439372 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830243 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001366244 |
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| Protein GI | 153000563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.535933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGT TAACTTGGTG GCGTGGTGCG GTGATTTACC AAATTTATCC GCGTAGCCTT
TTAGATACAA ATGGTGATGG CGTTGGTGAT TTACGCGGCA TTATCACTAA GCTGGACTAC
ATTGCGAGCC TCAATGTCGA TGCCATCTGG ATTTCGCCTT TCTTTAAATC GCCTATGGCA
GATTTTGGCT ACGACATCAG TGATTACCGT GAAGTTGACC CTCTTTTTGG CACTATGCAT
GATTTCGATG AATTGATTGA AAAAGCCCAT GGCTTAGGTA TTAAGGTCAT TATCGATCAA
GTATTAAGTC ATACCTCTGA TCAGCATGCG TGGTTTGTTG AAAGCCGCGA GAGCCGAACG
AATCCCAAAG CGGATTGGTA CGTGTGGGCC GATCCTAAGG AAGATGGCAC TGCGCCTAAC
AACTGGCTCG CGATTTTTGG CGGTTGTGCT TGGGAATGGG AACCGCGTAG ACAACAATAC
TATTTACATA ACTTCCTGCG TAGCCAGCCC GATATTAATT TCCATAATCC TGACGTGCGC
CAAGCTGTGC TGGATAATGT TGAATTCTGG CTTAAAAAAG GCGTTGATGG ATTCCGCTTA
GATGCGATTA CCTTCTGTTA TCACGATGAA CAGCTCAGGG ACAATCCGGC AAAACCTAAG
GATAAACGTC AGGGCCGAGG TTTCAGCGAA GATAACCCCT ACGCCTATCA ATATCATTAC
TACAATAATG ACCGTCCGCA AACTATCGCG TTTATCGAAG ATTTACGAAA GCTTATCAAT
CGTTACCCTG GTGCGGTGAC CTTAGGTGAA GTGTCGGCAG AAGACTCTTT AGCTGTGATG
GCGGCTTACA CTAAGGGTGA AGATCGCCTG CACATGGCCT ACAGTTTTGA GCTATTAACC
GACGATTACA GCGCCGCTTA TATTCGCCAA ACCGTAGAAG CATTAGAAGC GAGCATAGGT
GATGGCTGGC CTTGTTGGGC TATCGGTAAT CATGATGTGC AGCGCGTGGC GAGCCGTTGG
GGGCAGGGCA AGCAGAATTC AGACATGGCC AAAATGCTCA ATGCCATGCT AAGTTCACTG
CGCGGTAGTG TGTGTAGTTA TCAAGGTGAA GAACTCGGTT TAACCGAAGC GCCGATTGAA
TACCATGAGT TGCAAGATCC CTTTGGCAAA ACCTTCTGGC CTATGTTTAA AGGCCGCGAT
GGTTGCCGTA CGCCAATGCC GTGGCAGCAA GGCGCCGATT TTAGCGGTTT TAGTGAGGTT
TCGCCTTGGT TGCCGATCGC CCCTGCGCAT CAAGTGTTAG CGGTAGATGT ACAAGAATCA
GATGCAGATT CCATGCTTAA CGGTTATCGA CGTTTTCTTG CTTGGCGTAA ATTACACCCA
GTGCTGGTTG AAGGCGATAT CCAATTTGTG GATACCAACC AGCCCATCTT GGCCTTTATC
CGCACTTTAG GAGAGCTCAA AATATTCGTC GGATTCAACT TAGGCGATAC CAATGTTGAG
TTGGATTTAT CACAGTTGGA ATTGGGTGAA ATATTAACGG GACATGGCCT GAAAACCGCA
CAAATAGAAA ACAATCAGCT GAAGTTTTCG GCATTTGCCA GCTTTTATGC AGTTTTAAAC
TGA
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| Protein sequence | MSELTWWRGA VIYQIYPRSL LDTNGDGVGD LRGIITKLDY IASLNVDAIW ISPFFKSPMA
DFGYDISDYR EVDPLFGTMH DFDELIEKAH GLGIKVIIDQ VLSHTSDQHA WFVESRESRT
NPKADWYVWA DPKEDGTAPN NWLAIFGGCA WEWEPRRQQY YLHNFLRSQP DINFHNPDVR
QAVLDNVEFW LKKGVDGFRL DAITFCYHDE QLRDNPAKPK DKRQGRGFSE DNPYAYQYHY
YNNDRPQTIA FIEDLRKLIN RYPGAVTLGE VSAEDSLAVM AAYTKGEDRL HMAYSFELLT
DDYSAAYIRQ TVEALEASIG DGWPCWAIGN HDVQRVASRW GQGKQNSDMA KMLNAMLSSL
RGSVCSYQGE ELGLTEAPIE YHELQDPFGK TFWPMFKGRD GCRTPMPWQQ GADFSGFSEV
SPWLPIAPAH QVLAVDVQES DADSMLNGYR RFLAWRKLHP VLVEGDIQFV DTNQPILAFI
RTLGELKIFV GFNLGDTNVE LDLSQLELGE ILTGHGLKTA QIENNQLKFS AFASFYAVLN
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