| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2038 |
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| Symbol | |
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| ID | 5371384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2434527 |
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| End bp | 2437253 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640830242 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001366243 |
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| Protein GI | 153000562 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.130369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAT TTAAACCTAG TTTGCTAACC TTAGCGCTCA TTGCCGCAGG TGCGAGTATG
CACTCCTATG CGGCAGATGA AGCGGCGACA GATAAGACAG CTAAAGATGA AAATATTGAA
GTGATTCAAG TCACTGGTAT TCGTCGTAGC TTGCAAGAAT CCCAATCACT TAAGATGTCA
TCTTCTTCTA TCGTTGAAGC CATTTCAGCG GAAGACATAG GTAAATTACC TGATGTCAGT
ATTGCAGAAT CTCTAGCACG ATTACCTGGC GTATCGGCAC AACGACTCGA TGGTCGTGCC
AACGTAATTT CTATCCGCGG TATGGGCCCT GACTTCACTA CCGCCACATT AAATGGTCGC
GAACAAGCCT CTGTAAACGA TAACCGCAGT GTGGAATTCG ACCAATATCC ATCTGAGTTA
TTAAATCGCG TTGTGGTTTA CAAGACACCC GATGCCTCTG TGATGGCACA AGCCATCGGC
GGTACGGTTG ATATGCAAAC AATCAGTCCT TTAGCCCACG GTGAACAAAC GATTGCCGTT
TCGCTACGCG GCGAAATGAA CGATTTAGGT TCATTAAACA GCGGCTCAAG TGACACAGGC
TACCGCGGCA GTATCTCTTA TATTGACCAA TTCGCCGATG ACACTATTGG TGTCGCCATT
GGTTATGCTC GCATGATGTC ACCTAACCAA GAAGAACGTT GGCAAGCTTG GGGTTACCCA
ACCAATGACA ATAGTGATAG CGTTTTAGGT GGTGCAAAAC CTTTCGTTCG TTCAAGTGAA
TTAGAACGTG ATGGCGTACT CGCCGTATTT GAATATGCGC CAAATACCAC TTACCACTCG
ACCTTAGATA TTTACTACTC AAAATTTACC GATGATCAAC GCCTACGAGG CATTGAAATA
CCTGGTGCTT GGGGCACAAA CGGTGGCGTA ATTCCGACGA CAACTGATAA TGGTTTAGTC
ACAGAAGGTG TCATCAAAGG CGCTGAAGTC GTTATCCGTA ACGACGTGAA CAAACGTGAT
GCGGATTCTC TGTCTATTGG CTGGAATAAC AAATTCAACA TCAATGATAA CTGGAATGTT
GAAGCCGATA TCTCCATGTC TAGAGCTAAC CGTACTGACA TAGGTATGGA AAGTTACTCA
GGAACTGGCC GCGGTACAGG TGTGGGTGCG GTTGACGATT TAGGCTTTGC TTACAACGGT
AAAGGCGGTT ATGTATTTGA CCATAACCTC GATTATTCTG ATAAAAACCT GATCAAACTT
GGCGACCCAC TCGGTTGGGG TAGCCCGCTA GGCGCTAACA CTCAAGACGG CTTTATCAAC
AAACCTGAAA TTGAGGATGA GCTAAAATCC TTCCGTTTAA GCGCTGAATA TGTGCTCGAT
GGCGGTGCCG TTCGTAGCGT TGAGTTTGGT GTGAATCGTA CTAATCGCGA TAAAACCAAA
TTAGATAAAG GTTATTACCT GACACTTAAA GGGTATGACG GTTCTGCCGA TTACACTATG
GCAGTACCAG ATCAATACTT ACTTGCACCA ACGTCACTAG ACTTCTTTGG CATGGGCAAT
GTATTGAGTT ACGACTCGTT GGCTTTCTAC AATGACGGTA ACTATACAGA AACTGACGTC
GCTGATGTGG ATCTTTCCCG CGCCACTAAC TCTTGGGCTG TACAGGAAAA AGTGACAACG
GGCTATGTGA TGGCCAACCT TGAATCCGAA GTATTTGGTA TTCCTTTGAC TGGTAACGCA
GGCTTACAAG CGGTTCATAC CGATCAGTCC TCTGACGGTA CAGTGGCAAC GGTTGAAAAT
GGCTTAGTGG TGTTAACACC ACGCACTGCG GGTGATTCCT ATGTTGAATG GCTGCCAAGC
GTTAACTTAA GTTTCGAAGT CGCCGATAGC CAAGTGGTTC GTTTAGCCGC AGCGCGCACG
TTAACCCGTT CACGCATGGA CAAAATGAAT GCCAACCTAA ACTACACTTA TTCAGCTAAC
CCAAGTGGTG GCAACGTTAA CTGGAGTGGT AACGCAGGTA ATCCTGAGTT ACGTCCATGG
TTAGCCCGTC AATATGACTT AAGCTATGAA AACTATTTCA GCGACCAAGG TTATTTCTCG
GTAGCAGTAT TCTACAAAGA TCTTGAAAAC TTCGTTTACG ATCAACATAC AGACTTTGAT
TTCAGCACCC TATTCCCACA AGGGCCTACT GATAACCCGA TTGGCGATGT CACCCAACCT
CAAAACGGTG AAGGTGGTTA TGTTCAAGGT GTTGAAGCCT CTGTATCTGT CGACTTTGGT
ATGTTTGCCG ATGTGTTAAG TGGCTTTGGT ACTGTTATTA GCGGCTCGTA CAACGACAGT
GAAGTGAAGG AAACCCCGAC CAGCAATCCA ACAACCTTGC CAGGTCTGTC AGAAAAAACC
TTAAACGCGA CGATCTACTA TGAAAACTCA GGCTTTGAAG CACGTATTAG CTCACGCTAC
CGCAGCGACT TTCTCGGTGA AGTCACAAAG ATCAGCCTGC AACGCGAAAA CGTGAACATC
AAAGCTGAAA CAGTGGTCGA TGCACAAATC GGTTATGACT TTAGCGAAAG CGGTATCGAG
TCTCTGTATG GTTTATCAGT TCAGTTCCAA GTGAACAACT TAACCAACGA GCCTTTCACC
TCTTACACTA GCGATGATCA ACGTTTAGTC CGTGATTACC AAAACTATGG CCGTAACTTT
ATGTTAGGCG CGAACTATAA GTTCTAA
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| Protein sequence | MMRFKPSLLT LALIAAGASM HSYAADEAAT DKTAKDENIE VIQVTGIRRS LQESQSLKMS
SSSIVEAISA EDIGKLPDVS IAESLARLPG VSAQRLDGRA NVISIRGMGP DFTTATLNGR
EQASVNDNRS VEFDQYPSEL LNRVVVYKTP DASVMAQAIG GTVDMQTISP LAHGEQTIAV
SLRGEMNDLG SLNSGSSDTG YRGSISYIDQ FADDTIGVAI GYARMMSPNQ EERWQAWGYP
TNDNSDSVLG GAKPFVRSSE LERDGVLAVF EYAPNTTYHS TLDIYYSKFT DDQRLRGIEI
PGAWGTNGGV IPTTTDNGLV TEGVIKGAEV VIRNDVNKRD ADSLSIGWNN KFNINDNWNV
EADISMSRAN RTDIGMESYS GTGRGTGVGA VDDLGFAYNG KGGYVFDHNL DYSDKNLIKL
GDPLGWGSPL GANTQDGFIN KPEIEDELKS FRLSAEYVLD GGAVRSVEFG VNRTNRDKTK
LDKGYYLTLK GYDGSADYTM AVPDQYLLAP TSLDFFGMGN VLSYDSLAFY NDGNYTETDV
ADVDLSRATN SWAVQEKVTT GYVMANLESE VFGIPLTGNA GLQAVHTDQS SDGTVATVEN
GLVVLTPRTA GDSYVEWLPS VNLSFEVADS QVVRLAAART LTRSRMDKMN ANLNYTYSAN
PSGGNVNWSG NAGNPELRPW LARQYDLSYE NYFSDQGYFS VAVFYKDLEN FVYDQHTDFD
FSTLFPQGPT DNPIGDVTQP QNGEGGYVQG VEASVSVDFG MFADVLSGFG TVISGSYNDS
EVKETPTSNP TTLPGLSEKT LNATIYYENS GFEARISSRY RSDFLGEVTK ISLQRENVNI
KAETVVDAQI GYDFSESGIE SLYGLSVQFQ VNNLTNEPFT SYTSDDQRLV RDYQNYGRNF
MLGANYKF
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