| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2031 |
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| Symbol | |
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| ID | 5373130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2423848 |
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| End bp | 2425584 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640830235 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001366236 |
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| Protein GI | 153000555 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA ACGTATCGGA TCATCTAGTC GAAATGCTAG TAGAAGCGGG TGTTAAGCGA
GTTTATGCCG TGAATGGCGA TAGTCTTAAT CCGGTCAATG ATGCTGTACG AAGGGATGGC
AGATTGCAAT GGATCCATGT CAGACACGAG GAAGCGGGCG CTTATGCGGC ATCTATGGAA
GCTGAGCTAA ATGGTATCGG TTGTTGCATG GGTAGCAGTG GTCCAGGGCA TGTTCATTTA
GTCAATGGAC TCTATGATGC CAATAGAGCT GAAAACCCCG TTATTGCGAT TGCGTCAACT
ATCCACACTG AAAAAATGGG ATTAGATAAT TTTCAAGAGA CAAGACCCGA ATCGTTATTT
CAAGATTGTT CAAAATATGT GTTTCTCGCC AATACCCCTA AACAAGCTAT CAATGGTTTG
CAAACGGCGA TTCAGCATGC CATCAGCAAG AAAGGAGTCG CTGTGCTCGG GCTTCCCGGT
GATGTGGCTT CAGCAAGTCT AGAATCTGTG CATACGGCGA ATAAAAACTT CTATACTCAA
CCCAGAATAA CCCCAAGCCA TGAACAGCTT GAAGAATTGG CAAGCGTCAT TAATGAACAT
GAAAAAGTGA TGCTGTTTTG CGGCCATGGC TGTCGCTATG CCGTCGAAGA AGTGATGCAA
TTGGCAGCAA GGCTTAATGC TCCTTTGGGA TATAGCTTTC GAGGAAAAAT ATTTTTTGAG
CGTAAAGAAA ATCCATATGC CGTTGGATTA AATGGGCTGT TAGGCAATAA GTCCGGTTTT
GAAGCCATGC ATCAAGCCGA TGTCCTGTTG ATGCTGGGCA CGGATTTTCC ATATAGTGAG
TTCCTTCCCG AAAAATGCAA AATTATTCAA GTCGATACTA AACCCGAAAA ATTAGGCCGT
AGAGCTAAAG TGGATTTTGG CTATTGTGGT GATATTAAAT CAACTCTTGA AGAGCTCATG
CCGTTAATCG ATGCCAAAAC GTCCACGGAT TTTCTCGACA AAACCCGTTC ACTGCATCAA
GAAATTGAAG CTATCTATGA GAGCTATGTG GAAGAAAAGG GCTCTGAAAA AAACATTCAC
CCAGAATATG TTGCCCATTT GGTGGATAAA CTCGCCGATG ACGATGCGAT ATTTACCGTT
GATACGGGGA TGAGCGCCGT GTGGGCCGCG CGTTATTTAA AGGCGGGAGC CAATCGCTAT
CTGACCGGTT CCTTTAATCA TGGCTCGATG GCGAATGCCA TGCCTATGGC GATGGGGGCT
GGTTTATCAC AACCAGACCG GCAAGTGATT GCGTTTTGTG GCGATGGCGG TATTTCAATG
CTGCTCGGCG ATTTAATGAC CATTAGCCAG TATCAAATTC CTGTCAAAAT CATCATCTTT
AACAATCGTT CGTTAGCTAT GGTGAAACTT GAAATGCGGG TCGAAGGTTA TATGGAGTGG
CAGACGGATA TGGTTAATCC TGATTTTATA AAATTAGCAG AGGCGATGAA CATTGCTGCA
TGGGAGGCGA CGGAGTCCAA AGATGTGGAA CTCGCACTGG TAAATGGATT CAAGCATAAG
GGACCTGCGA TAATCAATAT TTTTACTGTT CCCAATGCCC TGGCAATGCC ACCCACCCTA
AACTTCGAGC AAGTAAAAGG CTTTGCAGCA TCGATGACAA AATTAATGGT CAATGGAAAA
TTTGCCGAAA TCGTCGATAC GACCAAGAAC GATTTAAAAT ACTTACGGGA GTTATGA
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| Protein sequence | MSKNVSDHLV EMLVEAGVKR VYAVNGDSLN PVNDAVRRDG RLQWIHVRHE EAGAYAASME
AELNGIGCCM GSSGPGHVHL VNGLYDANRA ENPVIAIAST IHTEKMGLDN FQETRPESLF
QDCSKYVFLA NTPKQAINGL QTAIQHAISK KGVAVLGLPG DVASASLESV HTANKNFYTQ
PRITPSHEQL EELASVINEH EKVMLFCGHG CRYAVEEVMQ LAARLNAPLG YSFRGKIFFE
RKENPYAVGL NGLLGNKSGF EAMHQADVLL MLGTDFPYSE FLPEKCKIIQ VDTKPEKLGR
RAKVDFGYCG DIKSTLEELM PLIDAKTSTD FLDKTRSLHQ EIEAIYESYV EEKGSEKNIH
PEYVAHLVDK LADDDAIFTV DTGMSAVWAA RYLKAGANRY LTGSFNHGSM ANAMPMAMGA
GLSQPDRQVI AFCGDGGISM LLGDLMTISQ YQIPVKIIIF NNRSLAMVKL EMRVEGYMEW
QTDMVNPDFI KLAEAMNIAA WEATESKDVE LALVNGFKHK GPAIINIFTV PNALAMPPTL
NFEQVKGFAA SMTKLMVNGK FAEIVDTTKN DLKYLREL
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