Gene Shew185_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2030 
Symbol 
ID5373129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2421879 
End bp2423612 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content47% 
IMG OID640830234 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001366235 
Protein GI153000554 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.3933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCCG AATCTATGTC TACATCTACA AAATCAGCCA CAGAATCATT AATAAAATCA 
GCCACAGAAT CGAAAAGTGT CGCAATTTTT GGTGGTGGTA TTGCTGGACT AACGGCAGCC
CATGAATTTG CAAAACTTGG CTATCAAGTC AAGGTGTTCG AGGCGAATGC GGATGCGGGC
GGTTTTTTTA GAAGTGCCAG AAGGAAAGAG GAGCAGGGCA TGCCTTCTGA ATACTCTTGG
CATGGAATGG GTCCTTGGTA TAACAATTTT TTCGAACTCA TCAAGGAGAT CCCCTTTGAT
GAGCACTCCA GCCTCTATGA CAATATTCTT TCACGGCCTG TGGTATTCGG CTTAGCGCCT
AATTCAGGTG CGGCTCACTT TGGTGACTCT CACTCCGGCA ATGTCGATGT GGAAAACCTG
TTTAGTATGA CGACCAAAGA AAAATGGCTT TGGTGTTGGC TAATGGGAAA AGCATGGTGT
TCAAATACCC GAAGTAGCCA AAAGTACAGT AATATCAATG CGAAAGAAGC TTGGCGACCT
TATTTAGCCG CTTCGACATT GAGTACCTGG AGTTCCACTT TTGGCCCTTG GGTAGGTTCC
GACTGGTGTC ATGTTTCTTT CCATCATGTG GCGCATTTTT TCCGTAAGCA ATTAGTCACC
AAGTATTCGT ATCATCAAGC AGACAGTGAA GGCGGGCCGT GGGAACACAA GGCTCGTATG
GGATGGTTGC TGCTTAACGG GCCCAGCAGT GAAGTTTGGT TTGATAAATG GGTCGATGAT
CTGAAGAAAA AGCAGGTCGA GTTTCATTGG CAGACCCCAC TTCATCGTTT GTGTTTTGAG
AATAACAGCA TCACAGCGGC AGAGCTCGCC AATGGCGAAA CCGTTCAGGC CGATATCTAT
GTCCTCGCAC TCAATCCCTT TTCTGCGGCA GATGTTCTAG ACAGAAACCC GCAGCTTCAA
AATAAACCGC AACTCAATCT TTTTAAACCC TTGGTACAAC AGGGGCCGCA CACCCAAGTG
TCCTTCAGAA TTGGCTTCAA AGAACCAATG TCTTGGCCGC GGAAAAGATG CGCGCTGGTT
ATTTCAGACT CCGCCTTTAA CCTGACATTG TTTGCTCAGG AACAAGCGTG GGGAGAGTCG
AGTTCTCTGG GGGACGATAT TCAATCACTG TGGACTGTCA CGGCTTGTGT TTCAAAAGTC
CCTGGCCCAG TCCATGGCCT TTGTTTGGAA CAATGCACAG AGGAACAATT TCTGGATGAA
GTGTTATTTC AATTAAAACA GAGTCATGCC CTCGATGAAT TGGTCAAAAA GGCTAACGGC
GGTAAAAGCT GGCTAGATTT TTCCATCGTA AACATCACCG TTTGGCATGA ATGGGCGTTT
TCTCCTGAAG GCATAACATC GGCGCAGCCC AAATGGGTGA ACTCGACCCA TACCCAACAA
TATCTACCAC AGCAAAAGAC GACCATATCT AACCTAGTTC TTGCAGGCGC TCATACCCAA
ACGACGGCGG ATGTGTGGAG CATTGAGGCG GCGGTCGAGA GTGGCAAGCT GGCGGTAAAG
GTTTTTGAGC CGCAACTTAA GGTCATTCCA CAGTCGAACT TTCTGGTGTT GACTATCCTT
GGGAAAATTG ATGATGTGCT TTATTACTGC AAACTTCCTA ACGTGTTGGA TGTTGGTTTG
GCAGTCATTG TTATTTTGTC GGTGAGCGCC ATTGCCTTTG GGATTGCCGG ATAA
 
Protein sequence
MVAESMSTST KSATESLIKS ATESKSVAIF GGGIAGLTAA HEFAKLGYQV KVFEANADAG 
GFFRSARRKE EQGMPSEYSW HGMGPWYNNF FELIKEIPFD EHSSLYDNIL SRPVVFGLAP
NSGAAHFGDS HSGNVDVENL FSMTTKEKWL WCWLMGKAWC SNTRSSQKYS NINAKEAWRP
YLAASTLSTW SSTFGPWVGS DWCHVSFHHV AHFFRKQLVT KYSYHQADSE GGPWEHKARM
GWLLLNGPSS EVWFDKWVDD LKKKQVEFHW QTPLHRLCFE NNSITAAELA NGETVQADIY
VLALNPFSAA DVLDRNPQLQ NKPQLNLFKP LVQQGPHTQV SFRIGFKEPM SWPRKRCALV
ISDSAFNLTL FAQEQAWGES SSLGDDIQSL WTVTACVSKV PGPVHGLCLE QCTEEQFLDE
VLFQLKQSHA LDELVKKANG GKSWLDFSIV NITVWHEWAF SPEGITSAQP KWVNSTHTQQ
YLPQQKTTIS NLVLAGAHTQ TTADVWSIEA AVESGKLAVK VFEPQLKVIP QSNFLVLTIL
GKIDDVLYYC KLPNVLDVGL AVIVILSVSA IAFGIAG