| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2028 |
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| Symbol | |
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| ID | 5372555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2418757 |
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| End bp | 2419995 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830233 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001366234 |
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| Protein GI | 153000553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.180465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATG TTATGGAAAA AATAGTGATA AAAAACCTGT ATAAGGTTTT TGGTGCTGAG
CCTCGCAAGG GGGTGAAGTT ACTTGAACAA GGGAAAAGCA AAGAAGAAAT TTACGAACAG
ACAGGGCTGA CAGTTGCCGT ACAAGGTGCC AGCTTTACCG TTAATAAAGG TGAGATTTTT
GTCGTTATGG GGCTATCCGG CTCAGGAAAA TCAACCCTAG TAAGAATGTT AAATAGGCTC
ATTGAACCCA CGTCGGGAGA GGTATTAGTC GATGGCCAAA ATATCCTCAA CATGAATAAG
GATGAGCTGG TCAGGTTTCG CAGAAGTAAA ACCAGTATGG TGTTTCAATC CTTTGCGCTT
ATGCCCCATC AAACAGTGTT AGAGAATGCC GCATTTGGCC TCGAACTCGA TGGCATGGAT
AAAAAACAGC GTGAAGAACG AGCCCTAGAT GCTTTAAAAC AAGTCGGACT CGAAGGCTTG
GAGAAGGCCT ATCCCAATGA GTTAAGTGGC GGTATGCAGC AGCGAGTAGG ATTAGCGCGA
GGCTTAGCGG TTGATCCTGA TATCTTGCTC ATGGATGAGG CATTTTCGGC GCTTGATCCG
CTTATCAAGA CAGAGATGCA AGATGAACTG CTGAAACTGC AAGATCGTCA TGAACGCACC
ATCATTTTTA TCTCCCATGA TTTAGACGAA GCATTACGCA TTGGCGACCG AATTGCCATT
ATGCAGGGCG GCAGAGTGAT TCAGGTGGGG ACGCCGGAAG AAATCCTGCA AAATCCCGCG
GACGATTATG TGCGCGCATT TTTCCGTGGT GTGGATCCAA CCGGTGTTAT CTCCGCTGGG
GACATTGCCC GCGACAGTCA GCCAACGGTC GTTTGGCATA CTAAAGCCGG TAGCCCACGC
GCCACCCTAG AAATGTTAAG CATTAAAGAT CGCGAATTTG CCTATGTACT TGACTCAGAA
CACCGCTTTT TAGGTGTGGT CTCTTCAGAC TCCCTGCGCG ACGCTGTTGA CCAAGGAAAT
GGTGCTAGCA AACTTGAGCA TGCTTTTCTG ACAGACGCTA AATCAGTTCA AGAAACAGAT
AGCCTTCAGG ATATCTTACC CTTGGTCGCC TCCCATGCTT GGCCTATTCC AGTTGTAAAC
TCAGAAAGTA GATATCGCGG CGTTGTTTCT AAAAATCTGT TTCTTCGCAC CTTAAACCGT
GCGGAAAAGG GGACTTATTT CGAGCAATCA GCATCTTAG
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| Protein sequence | MENVMEKIVI KNLYKVFGAE PRKGVKLLEQ GKSKEEIYEQ TGLTVAVQGA SFTVNKGEIF
VVMGLSGSGK STLVRMLNRL IEPTSGEVLV DGQNILNMNK DELVRFRRSK TSMVFQSFAL
MPHQTVLENA AFGLELDGMD KKQREERALD ALKQVGLEGL EKAYPNELSG GMQQRVGLAR
GLAVDPDILL MDEAFSALDP LIKTEMQDEL LKLQDRHERT IIFISHDLDE ALRIGDRIAI
MQGGRVIQVG TPEEILQNPA DDYVRAFFRG VDPTGVISAG DIARDSQPTV VWHTKAGSPR
ATLEMLSIKD REFAYVLDSE HRFLGVVSSD SLRDAVDQGN GASKLEHAFL TDAKSVQETD
SLQDILPLVA SHAWPIPVVN SESRYRGVVS KNLFLRTLNR AEKGTYFEQS AS
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