| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2026 |
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| Symbol | proX |
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| ID | 5373242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2416878 |
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| End bp | 2417882 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640830231 |
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| Product | glycine betaine transporter periplasmic subunit |
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| Protein accession | YP_001366232 |
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| Protein GI | 153000551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.259484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTTA AAAATGTAAT ACTGGGTGCA GCGTTAGCTG CAATGACAGT GACGGGATCC
GCAGCGCTTG CAGATACTCT CAAGCCAGGG GAAGGGATAA CCGTTAAACC CGCTCGGGCG
ACATGGGACA CAGGTTTTTT TCAGGAAGCA CTTGTTCGAC GCGGTCTTGA AACGCTTGGG
TATGATGTCG AAAAACCTAA GACATTGGTC AATCCCATCT TTTATAAAAC CGTCACACTC
GGTGACATTG ATTATTGGGC CAATGGTTGG TTTCCAATGC ATAACGATCA GCTACCGAGT
AATTTCGACG AGAAAGCTGA AAAGATTGGT TATGTTATTA AAGCCGGTGG ATTAGGCGGA
TATTTAATCT CTAAAAAAGA AGCCGATAAA TACAATATTA CCTCTCTTGC AGATTTTAAA
CGCCCTGAAG TCAAACAAGC ATTTGATACT AATGGAGATG GTAAAGCGGA TTTGACTGCA
TGTCCTCCTG GTTGGGGATG CGAAAAAATC ATCACTCACC ATATGGATGT TTACGGTCTG
AAAGATTCGA TTAATCCAGT GAAAGCGGCC TATGCTGCCG GGATGGCATC CGCTATGGCG
GGTTATAAAA ATGGTGGCCC GATATTTTTC TATACTTGGT CGCCCAACTG GACCATTTTT
AAAATGAAGC CAGGCAAGGA CGTTGTGTGG ATAAACGTGC CTGAAATCAA ACCAACAAAA
GCCCAGAGTG CTGCCGTTGA TCGGATGACG GTAAAGGCAC TCGAAGGCGC GGTTTCCGAT
CCGATAAAAC TGGGGTTTGT CGCTTCTGAC ATCCAGATCG TTGCCAACAA AAAATTCGCT
AAACAAAATC CCGCCGCGAG GAAGTTTTTT GAGGTATTCA CACTACCGCT CGCAGATATC
AACGAGCAGA ACACGCGTAT GAACGACGGT GAAAAGAGTA AGCAAGATAT TCAACACCAC
GTTGATGGAT GGATTGCCAA GAACCAAGAT AAATGGAACG GTTAG
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| Protein sequence | MRLKNVILGA ALAAMTVTGS AALADTLKPG EGITVKPARA TWDTGFFQEA LVRRGLETLG
YDVEKPKTLV NPIFYKTVTL GDIDYWANGW FPMHNDQLPS NFDEKAEKIG YVIKAGGLGG
YLISKKEADK YNITSLADFK RPEVKQAFDT NGDGKADLTA CPPGWGCEKI ITHHMDVYGL
KDSINPVKAA YAAGMASAMA GYKNGGPIFF YTWSPNWTIF KMKPGKDVVW INVPEIKPTK
AQSAAVDRMT VKALEGAVSD PIKLGFVASD IQIVANKKFA KQNPAARKFF EVFTLPLADI
NEQNTRMNDG EKSKQDIQHH VDGWIAKNQD KWNG
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