Gene Shew185_2025 details

Gene Information

• Locus tag: Shew185_2025
• ID: 5373241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 2416056
• End bp: 2416682
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640830230
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_001366231
• Protein GI: 153000550
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.464731
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTAA ATTCACTATT ACTGTTTGCA GTTGCTTGCC TTGCTATCAA TCTTATCCCT 
GGACCCGATG TTATCTACAT TGTATCTAAC ACAATGAAAG GGAAAATGAT CAGTGGGCTT 
AAAGCTGCGA TGGGTTTAGG TGTGGGTTAT TTTGTTCACA CGCTTGCTGC TAGCTTGGGA 
TTATCTGCCA TCATTCTCAG CTCAGCGTTG GCTTTTAGTA TTGTGAAGTG GTTGGGCGCC 
GCGTATCTAG TGTATTTAGG CATTCAAGCG TTAATATCAA TGTGGCGTGG CAACAATAAA 
ATTGTGGTCG ATGACAATAG CAAACCAAAC GGCAACGTAT TTTCCCAAGG CATTGTCGTT 
AGTGTACTTA ACCCTAAAGT CGCTTTATTT TTCCTCTCTT TTTTGCCGCA GTTTATTGAC 
CCGTTAGCAG GTTCAACGTC AATTCAGCTG TTAACCCTTG GTCTTATTTT CAGTTTGTTA 
GCGACCCTGT GTAACGTCCT CTATGCGTCG GCAGGAAGTT GGGTATTTAG TCGCCCCAAT 
TCCCAGCGTT ATTCCAGAGC CTTAGAGGGG ATATCAGGGG TGTTGCTTAT TGGCTTGGCC 
AGTAAAGTCA TGACCAGTGA TAGATAG 

 

Protein sequence

MDLNSLLLFA VACLAINLIP GPDVIYIVSN TMKGKMISGL KAAMGLGVGY FVHTLAASLG 
LSAIILSSAL AFSIVKWLGA AYLVYLGIQA LISMWRGNNK IVVDDNSKPN GNVFSQGIVV 
SVLNPKVALF FLSFLPQFID PLAGSTSIQL LTLGLIFSLL ATLCNVLYAS AGSWVFSRPN 
SQRYSRALEG ISGVLLIGLA SKVMTSDR