| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2020 |
|---|
| Symbol | |
|---|
| ID | 5373697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2411272 |
|---|
| End bp | 2412051 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640830225 |
|---|
| Product | glutamine amidotransferase class-II |
|---|
| Protein accession | YP_001366226 |
|---|
| Protein GI | 153000545 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000156319 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGAGT TACTGGCGAT GAGCGCCAAT GTGCCAACCG ATATTGTGTT TAGTTTTACG
GGATTAGCAC AACGTGGAGG CGTAACAGGT CCCCATGTGG ACGGCTGGGG TATTACGTTT
TACGAGGGCA AAGGCAGCCG TACTTTTAAA GATGCTTGCC CGAGTAGCGA ATCGCATATT
GCAAAATTGA TCAAATCCTA CCCGATTAAA AGTGAAGTGG TGATAAGCCA TATTCGCCAA
GCGAATCGCG GCTGCGTGTC TTTAGAGAAT ACTCATCCTT TTACCCGCGA ATTATGGGGA
CGTTATTGGA CCTATGCCCA CAATGGCCAA TTGACGGACT ATCTGCCTAA GTTCAACGTC
TCGCGCTATC AACCCGTTGG CGATACTGAC AGCGAACTCG CGTTCTGCTG GATTTTGGAA
CAAGTTGCCC GGAAATTTGG CGGTACTCAG CCCGAAGATA TGCTGGCTGT GTTCCATTAT
GTCGCGACGT TGGCCGAGCA AATCCGTGCC TTAGGTGTGT TCAACATGAT ATTGAGCGAT
GGCGAGCATT TGATGAGCTA TTGCAGTAAC AATTTATGTT ACATCACTCG CCGCGCGCCG
TTTGGCAAAG CGAAACTTAT CGACACCGAT GTAGTGATTG ATTTTGATAA GGAAACCACG
GCCCACGATG TCGTGACTGT GATTGCGACT CGTCCATTGA CTGAGAACGA ACAGTGGTAT
GTCATGCAGC CCGGCAACTG GAAGTTGTTT AGATTAGGCG AGCTGTTAAT CGATCTTTGA
|
|---|
| Protein sequence | MCELLAMSAN VPTDIVFSFT GLAQRGGVTG PHVDGWGITF YEGKGSRTFK DACPSSESHI
AKLIKSYPIK SEVVISHIRQ ANRGCVSLEN THPFTRELWG RYWTYAHNGQ LTDYLPKFNV
SRYQPVGDTD SELAFCWILE QVARKFGGTQ PEDMLAVFHY VATLAEQIRA LGVFNMILSD
GEHLMSYCSN NLCYITRRAP FGKAKLIDTD VVIDFDKETT AHDVVTVIAT RPLTENEQWY
VMQPGNWKLF RLGELLIDL
|
|---|
| |