Gene Shew185_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2016 
Symbol 
ID5373219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2402817 
End bp2404190 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content49% 
IMG OID640830220 
Producthypothetical protein 
Protein accessionYP_001366222 
Protein GI153000541 
COG category 
COG ID 
TIGRFAM ID[TIGR03503] conserved hypothetical protein TIGR03503 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000139386 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGT CGTGCCATAA ACCCATTTTA GCGCTTTGCC TTGTTGTCAC TACGCTGTTT 
GCCAGTGTGA CTTCGGTATT GGCCGCCGAG GTTGAAACCG CTAAAAAAGT CGTCAAGCCG
CCCAAGGCCG CGCCGATTAT AGGATTGGAG ACGGCTTCTG AGCTTAAAAA CCGTTTTCGA
ATCGACCATA TGGTCGATAA CATGACGCTG TTAGTGGAGC GTGAATACGG TTCTGCACCG
GTAGTCATTG TGTTGCCCGA TGGCAGTAAA TGGTACGCCA ATCGCCATCC CGAAACTGTC
AAGTGGGTCG ATGGCATTAC CGGCGATATT ATTTACATTG AGTCGCCTAT GCCTGGACCT
TGGCAATTGG TGGGTAAAGT CGTCCCGGGT TCGACCCTCA AAAAACTCTC TAAACTCGAA
ATCGAAGTGC AGCCTTTGCC GCAGCCGCTA TTCCAAGGTG AGCAAGTGAA AATTGTCGCC
CAGTTGATGG GGGATGCTCA GCGTGTGCGC ATGCCGGGAC TCGACTTTCT GGTGGAATGG
ACGGCTCATT TTGTGAGTAA GCACCGGGCC GGCGATGAGA ACTTTGCCGC GGGTGACATT
ATTGTTGGTT CTTATAAAGA CAATGGTGAA GATTATGATG AAAAACCCGA TGATGGCGTA
TTTACCAGTA ATCTCAATGT AAAGCAGCCT TGGGGTGATT ATGAGTTTGT GGTGCAAGCA
CGCAACAACG TGTTTGAGCG GCAGATTTCA TTTCCGTTTA GATTATCGCC GCGGCCAATT
AATTTAGAAG TCATTACCCC AGACGATCCG TTAACGGGGC AGTGGAAAAT CATGCTGCAC
GTCGATAGTG CTGTGCTGCA ACTGGCTGAA ACGCATTTTT CCTTTGAGCT AGTGGGCCCT
GCGGGCTTGC AACTGCCTTT GACCGTTAAT GGTCTTACAG AGCCGGACTC TGAATTAGAT
TTACCGACTG TGACTGAGTT TGGCAGTTAT CGAATTAAAG GTTTCGTGGC GACGACGACG
ATTACGGGGC GAGAAATCGT ACTGGATTTG CCAGAGCTAT TTTTCAACTT AATTCAGCCG
CCAGAGCCGC CACCAAGCGC TGAAGAGTTG GCCGCCGTTG CTGCACAAAA AGCCGCAGAG
GAAGAAGAAC TTGCGAAGAA AGATGCCATG TTCTGGATCA TCACGATCAA CGCGATTTTA
TTAGTCTTGG GCGTAGTGGG ATTAATAGTG TGGCGTAAAC GCCAAAGTTT AGCGCAGGCA
TTAGCTGCTG CTGAGTTACG TTTATTGGAG GAAGCATCGG CGAATCCAGC AGCTGCGCCG
TCATTAGATG AAATCGATCT CACTATGCCA GATGAGGCGG ATAAAGATCG TTAG
 
Protein sequence
MPMSCHKPIL ALCLVVTTLF ASVTSVLAAE VETAKKVVKP PKAAPIIGLE TASELKNRFR 
IDHMVDNMTL LVEREYGSAP VVIVLPDGSK WYANRHPETV KWVDGITGDI IYIESPMPGP
WQLVGKVVPG STLKKLSKLE IEVQPLPQPL FQGEQVKIVA QLMGDAQRVR MPGLDFLVEW
TAHFVSKHRA GDENFAAGDI IVGSYKDNGE DYDEKPDDGV FTSNLNVKQP WGDYEFVVQA
RNNVFERQIS FPFRLSPRPI NLEVITPDDP LTGQWKIMLH VDSAVLQLAE THFSFELVGP
AGLQLPLTVN GLTEPDSELD LPTVTEFGSY RIKGFVATTT ITGREIVLDL PELFFNLIQP
PEPPPSAEEL AAVAAQKAAE EEELAKKDAM FWIITINAIL LVLGVVGLIV WRKRQSLAQA
LAAAELRLLE EASANPAAAP SLDEIDLTMP DEADKDR