Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2015 |
Symbol | |
ID | 5371912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2402078 |
End bp | 2402806 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830219 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001366221 |
Protein GI | 153000540 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000147945 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA TCTCTAACGC TAGCCGTCAG GTTATTTTGG ATACCGAAAC CACAGGTATG AACCAGGGTA GCGGCGCCAT CTATTTAGGC CATAGGATCA TCGAGATTGG TTGTGTGGAA GTGGTGAACC GCCGTTTGAC GGGGCGTTAT TACCACCAAT ATATCAATCC AGGTCAAGCC ATCGATCCTG AAGCCATTGC CGTTCACGGT ATTACCGATG AGCGCGTTTC CAAAGAGCCG CGTTTTCATC AAGTTGCTCA AGACTTTATC AACTTTATCG ACGGCGCTGA AATCGTCGCC CATAACGCGA ACTTCGACGT GAGCTTCATG GATCATGAGT TTTCACTGTT GCAGCCGCGT GGACCCAAAA CCGCTGATAT TTGTCAGATC CTCGATACCT TAGTCATCGC TAAGTTCCTG CATCCTGGTC AGAAAAACAA CCTTGACGCC CTCTGTAAGC GTTATGGTGT GGATACGTCG CGCCGCGAAT ATCACGGTGC TTTGCTCGAT GCCGAGATCC TCGCCGATGT TTATCTGATC ATGACCGGCG GGCAGACAAA GTTTAATTTG TCTAACGAGG AAGCGGGGCA GGAAGCGGGG GGGATTCAAC GTTTTGATCC GCAATCACTT AACCTTAAAG TGATCGGCGC ATCGGCCGAT GAATTGACTA TGCATGAACA ACGCCTTGAT TTAGTCGCAA AATCAGGCAA ATGCCTCTGG AGAGGATAG
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Protein sequence | MNIISNASRQ VILDTETTGM NQGSGAIYLG HRIIEIGCVE VVNRRLTGRY YHQYINPGQA IDPEAIAVHG ITDERVSKEP RFHQVAQDFI NFIDGAEIVA HNANFDVSFM DHEFSLLQPR GPKTADICQI LDTLVIAKFL HPGQKNNLDA LCKRYGVDTS RREYHGALLD AEILADVYLI MTGGQTKFNL SNEEAGQEAG GIQRFDPQSL NLKVIGASAD ELTMHEQRLD LVAKSGKCLW RG
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