Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2002 |
Symbol | |
ID | 5372186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2386607 |
End bp | 2388232 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830206 |
Product | cyanophycinase-related exopeptidase-like protein |
Protein accession | YP_001366208 |
Protein GI | 153000527 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4242] Cyanophycinase and related exopeptidases |
TIGRFAM ID | [TIGR02069] cyanophycinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.083735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCT GCAGCTCTCA AGCTCCCGCA AATTGCCAAT CGGAAGTCAA ATTCTCAGCC GATGCCAAAC GCGAAACACG TTATTTGTTC AACGTTTCGT GGCTTGAACG TGCACTTAAA CACCCAAGAT TGCAGTCGTT AAATGAGCAA CAGAAAGTGA TATTACGGCA AGCGGCTAAA GCACTTCCTC CTGTCAGTAA CAGTCTTAAA AATAGTGATG TTGAAATTGG CCGTTCACTT GGCCGTTTAC ATAGTGACAG CTTAACCTTG GCAAACCTTG AACAAGCCAT TGCAAAGATA GATAAGCAAT TTCTGGCGCA TTTGAGCAAC CAACAATATT ACACACTGCT GGATTTACTG GAAGAAAAGC AGATGCTTGC TGACGGCACG CTGTTACAAG AGCAAGTGTT ACTTGATTCC ACAACCAATC CCCATGCCGC GACGCTTTAC CAATTATTTA CGCAGCAAGC GTTAACAAAG CGCCAGCAAA GCAACCCCAA TTCCAAACGT CCACTGATCG CCGTTGTGAC CGCATCTGCG CGCGATCCCT TTGAAGCGGC CCATTACTAT GTCAGCGTAT TTGAGCAAAT GGGGGCCGAG GTTATTTGGC TGCCTTTAGA TGCTGCACTG CAAGCGGGTA TCGCAACCCG TCAGTGTGAT CAACTCGAAA TGTTTAGACA GCAAATACAA GGTAATACGG ATAGGGCGAG GCTTTATCCA AAGCAAGTTG AGCTACAAAA GGATTTATGT GCTAGCCCCA TTAAACTCTA TCAATTGCTT AATCAAATCG ACGGACTCTT TTTAAATGGC GGCGATCAGA GTCTGACTTT AATGGCTTGG ACTACGCCGG AGAAATTACC CAGCGAAGCA TTAACCATCA TCAAAAAACG TCTTTCCAAA CAAGAAATTG TCATCGGCGG CACCAGCGCG GGCACTGCTG TGATGGCTGA TAGAAATATG ATCACCGGCG GCACGAGTGA GGGGGCGCTG AGTTTTGGCG TTTTCGCGAC CGAGGCGCCA AGTGAGCGTT GTGAAGTCGC TAATTGTGAT GCCTCAGTTC CTGCAACGGC GGTCACTTAT CGCGAGCAAG GTGGGCTTGG ATTTTTCCCC TTTGGTATAC CCGACACACA CTTTTCACAA CGAGACCGTT ATTTAAGACT CTTGCTCCTT AGCGCCAATG CTGATAGCAA AATGGCATTT GGAGTCGATG AAAATACAGC ATTATTGGTC GATTTATCAC ATCGTTCACT CTCTGTGGTC GGTGAGCATG GAGTATGGGC ATTAGCGCAA GTTGAGCGAT TGAAACAAAG CCAAGCTAAC TCTGAAATAA ATGCGGTTTC GCACTATCTC ACTCCGGGTT CCTATGCTGA AATTGACGCC ACTAGTGAGT ATTTGACTCA TATCCGCCTA GCTCAGACTG CCAAATTGAC GCCAATAATG AGTAAGCAGA GTGACTTTTT TACTTGGGTC AGCAATGCGT GTCGGCAAGG TATATATTCA ACATCACTGA GTGATAAGTA CGAATTAACC ATTACTCCAA TGGCGGCATT AAGTTGCCAA GGCATTTTAA ATCAAGAACG CGGATATCAG TCGATGGGGT TAACACTAAA AGCGTTAGAT AAATGA
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Protein sequence | MKTCSSQAPA NCQSEVKFSA DAKRETRYLF NVSWLERALK HPRLQSLNEQ QKVILRQAAK ALPPVSNSLK NSDVEIGRSL GRLHSDSLTL ANLEQAIAKI DKQFLAHLSN QQYYTLLDLL EEKQMLADGT LLQEQVLLDS TTNPHAATLY QLFTQQALTK RQQSNPNSKR PLIAVVTASA RDPFEAAHYY VSVFEQMGAE VIWLPLDAAL QAGIATRQCD QLEMFRQQIQ GNTDRARLYP KQVELQKDLC ASPIKLYQLL NQIDGLFLNG GDQSLTLMAW TTPEKLPSEA LTIIKKRLSK QEIVIGGTSA GTAVMADRNM ITGGTSEGAL SFGVFATEAP SERCEVANCD ASVPATAVTY REQGGLGFFP FGIPDTHFSQ RDRYLRLLLL SANADSKMAF GVDENTALLV DLSHRSLSVV GEHGVWALAQ VERLKQSQAN SEINAVSHYL TPGSYAEIDA TSEYLTHIRL AQTAKLTPIM SKQSDFFTWV SNACRQGIYS TSLSDKYELT ITPMAALSCQ GILNQERGYQ SMGLTLKALD K
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