Gene Shew185_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1991 
Symbol 
ID5370472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2371314 
End bp2372249 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content45% 
IMG OID640830195 
Producthypothetical protein 
Protein accessionYP_001366197 
Protein GI153000516 
COG category[S] Function unknown 
COG ID[COG2253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.061979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT CATCGATATA CTACCAGCAA GTGACCTTGC TTATTCGGAT GCTGCCGCTC 
GTCGCCCAAG AGAAGGTATT TGCCCTAAAG GGCGGTACGG CTATCAACCT ATTTGTACGC
AACTTCCCAC GCTTATCGGT CGATATCGAT TTGGCTTATC TTCCTTTGGA GCCAAGGGAA
CAAGCGCTAC AAAGTGTGAA GGAAGCGCTT GGTCGTTTGA CTGCGCAGAT CAATCTACAA
CCGAACCTTA GTGCAGTATT TCAAGACAAT AAATATGATG AGCTCAGGGT TGTCGTGACA
AGTGATAGAG TCACAATAAA AATTGAAGTC TCTCCTGTTG CGAGAGGTAC GCTACACAAA
GCGGTATTAA TGCCAGTCGT TGAGTTAGTT GAAGAAGAAT TTGGGTATGC AGAGATCCCC
GTCGTAAGCC TGCCTGATCT ATACGGTGGT AAGTTATGTG CAGCGATGGA TAGGCAGCAC
CCAAGGGATC TTTTCGATGT GAAAATGCTG CTGGCGGAAG AGGGGATCAG TCGAGAGATT
TTAGTCGGCT TTCTCACTTA TACACTTAGC CATCCAAGGC CCATTAATGA AGTGATGTCT
CCACGCTGGA AACCGCTTGA TGAAAGCTTT CAAACTGAAT TCAATGGAAT GACGACAAAG
CCGATTAAAC TCGATGAGCT GGTTTTAACT CGCTCAGAAA TGCTGACAGC GTTGCAGCAT
CACTTTACTG CAAAAGACAG AGACTTTTTA TTATCTTTTA AACAGGGTCA GCCTGATTGG
TCATTGTTTG ATGAACCGAG CGTCGCGGCA CTACCTGCGG TGAGATGGAA GCTATTCAAT
ATCCAGAACC TAGCGAAAAA CAAATCCAAG CATCAAGAAC AACTCATTAA ACTGGCTGAT
GTATTGGAAA CGTGGGTTGC AGGTCGGATA CTGTAA
 
Protein sequence
MNKSSIYYQQ VTLLIRMLPL VAQEKVFALK GGTAINLFVR NFPRLSVDID LAYLPLEPRE 
QALQSVKEAL GRLTAQINLQ PNLSAVFQDN KYDELRVVVT SDRVTIKIEV SPVARGTLHK
AVLMPVVELV EEEFGYAEIP VVSLPDLYGG KLCAAMDRQH PRDLFDVKML LAEEGISREI
LVGFLTYTLS HPRPINEVMS PRWKPLDESF QTEFNGMTTK PIKLDELVLT RSEMLTALQH
HFTAKDRDFL LSFKQGQPDW SLFDEPSVAA LPAVRWKLFN IQNLAKNKSK HQEQLIKLAD
VLETWVAGRI L