Gene Shew185_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1990 
Symbol 
ID5373206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2370533 
End bp2371321 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID640830194 
Producthypothetical protein 
Protein accessionYP_001366196 
Protein GI153000515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.694197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAA AAATAAACTG GCTGATTAAT CATACGAGTC CTGGTGCGGT AGTGCTTCAG 
TCGTGGTTGA CACAAAATGA GATCAGCTCA TCTTTGGTGA GAAAATATGT GCAGAGTGGT
TGGTTGTACA AGATAAGTGC GGGGGTTTAC GTTCGTCCTG AGTCAACAGG TAAGTTACAG
CCTCATTGGG TTGAAGCGCT CAAGGCTGTG AATGAGCAGC TAAAGCTTCC TGTTCACCTT
GCGGGAGTCA GTAGCCTAAC GCATCAAGGG CTTAGTCATT ATCTTCAACT AAGCAGCGAG
CAAGTTTGGG TTGGCTGTCA AAGTAAGCAG GCGTTGCCAA AGTGGTTCCG CGAATTGGAG
GAGCAAAATT GGCTTTTCTA TACCAGTAGC AAGCTGACCC AAACGTTGGA AAAAGACTTT
ATTACTATAG GGGTGAACAA TAGGGAAGTT AAGGCAAGTT GTGCGGAGCT TGCAGCCTAT
GAGGTCGTCA ATGCCATTGG CAAACATATC AGTTTTGAGC ATGCCGCGGA GCTGTTTCAA
GGGTTAGTGA ATCTCAGCCC ACGTAAAATA CAGTCAATAC TGAATCGAAG TGAAGCCGTA
CAAGCTAATC GCGTATTTCT CTTTTTAGGC CACTACTATC AACACCAGTG GAGCAAAAGG
CTAGATGAGC AGCAAATCAC GCTTGGTGCG GGAAAGCGTC AGGTGGTGGC TCATGGCCGT
TACGATGGGC GGTATCAAAT AACAGTGCCG GCATCATTTA TTAAGACAGC AGAAAATCAA
TATGAATAA
 
Protein sequence
MSSKINWLIN HTSPGAVVLQ SWLTQNEISS SLVRKYVQSG WLYKISAGVY VRPESTGKLQ 
PHWVEALKAV NEQLKLPVHL AGVSSLTHQG LSHYLQLSSE QVWVGCQSKQ ALPKWFRELE
EQNWLFYTSS KLTQTLEKDF ITIGVNNREV KASCAELAAY EVVNAIGKHI SFEHAAELFQ
GLVNLSPRKI QSILNRSEAV QANRVFLFLG HYYQHQWSKR LDEQQITLGA GKRQVVAHGR
YDGRYQITVP ASFIKTAENQ YE