Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1976 |
Symbol | |
ID | 5370931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2348461 |
End bp | 2350938 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830180 |
Product | EcoEI R domain-containing protein |
Protein accession | YP_001366182 |
Protein GI | 153000501 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.411939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAACC ATAACGCGAG CATCAATAAA GCAAAGTTAA CCGAAACAGA TATCATCACA AAGTTCATCA TGCCTGCGGT AAAAAATGCG GGTTGGGATG ATATGACGCA AATTCGCCAG GAGGTGAAGT TGCGTGATGG TAAGGTGATT GTGCGGGGTC AAATGGGCAT GCGCACAACG GTTAAGTCAG CCGACATTGT GCTCTACCAT AAACCGAGTA TGCCGCTGGC GGTGATTGAG GCTAAAGCGA ATAAGCATGA AGTCGGTAAG GGCATACAAC AAGCACTCGA TTATGCTCAT TTGCTCGATG TTCCCTTTGT GTTTGCCTCT AACGGCGATG GTTTTATCTT CCATGACAAG ACCCATGCCA TCACAAACAG CCCGGGCACG CCAGAGGCTC ACAACCTTGA ATCCGAAATC CGCTTAGAAG ATTTTCCTAG TCCTGAAGAA CTCTGGGCTA AATATTGTAT TTGGAAAGGT TATACCGCAG CGCAGTTACC TATCATTAAC GAAGCCTATT ACGATGACGG CACGGGTAAG CACCCGCGTT ATTATCAGTT GCAAGCCATC AATAAAACCG TTGAAGCTAT CTCATCGGGT AAAGATCGGG TATTGCTGGT GATGGCAACG GGCACAGGTA AAACCTACAC AGCATTTCAA ATCATTTGGC GGTTATGGAA ATCCCGTGCC AAGAAACGCA TTTTATTCCT CGCTGACCGT AATATTTTGG TCGATCAAAC TCGCATAAAC GATTTTCAGC CCTTTGGCAC ATCGATGACC AAAATTACTG GCCGAACAGT CGATCCTGCT TATGAAATCC ATCTAGCACT TTATCAAGCA CTGACTGGCC CTGATGAGAG TCAAAAAGCG TTTAAACAAG TCGCTCCAGA CTTTTTTGAC CTGATCATTA TTGATGAATG TCATCGTGGC AGTGCCAGTG ACGACAGCGC TTGGCGCGAA ATTCTCGAGT ATTTTAGCAG TGCCGCGCAA GTAGGCTTAA CCGCAACCCC AAAAGAAACC GATGAGGTCT CTAACTCTGA TTATTTTGGC GATCCGCTTT ACACCTATTC GCTCAAAGAA GGTATCGACG ATGGTTTCTT AGCGCCTTAT AAAGTGGTTC GTGTGGATAT TGATGTGGAC TTACAAGGCT GGCGACCTAC AAAGGGCCAA ATCGACAACA ATGGCGAAGT GATCGAAGAC AGGATCTATA ACCAAAAAGA CTTTGACCGC ACTATGGTGA TTGATGAGCG TACTCAGTTG GTGGCCGAAA CCATAACTAA CTACCTTAAA CGCACCGATC CTATGGGTAA AACCATTGTT TTTTGCAACG ATATTGATCA CGCCGAACGG ATGCGCCGCG CGCTTGCCAA TCTTAACCCT GAGCAAATGG CGAAAAATGA CAAATACGTT ATGAAGATCA CCGGTGATGA TGAACTCGGC AAAGCCCAGC TGGATAACTT CATCAACCCT AAAAAGGCCT ATCCGGTTAT TGCGACCACC TCAGAACTCA TGACCACAGG TGTCGATGCG AAAACCTGTA AGTTAGTGGT GCTCGATCAA AATATTCAAT CCATGACCAA ATTTAAGCAG ATCATCGGTC GCGGCACTCG AATCGATGAT AAATATAATA AGTTATGGTT TACCATTCTG GATTTCAAAA AGGCAACCGA GTTATTTGCC GACGAACGTT TTGATGGTAC CCCTGAAAAA ATCATTAAAG TGACGCCTGA AGACATTGAA GATGAAGACG TGGATATTGA TGCCGCTGAT GATGAACCAA ACGAGGAAGA TGTTCAGGGG GACATTCAAG ATGAACAACA AGGCGAAGGC CAAGACAACA CCAAAAATGA TCCTCAAGGC GATGGTAGCT TTGATGAAGG TGAATGGGAC GAAGGCGAAA TCCGTAAGGT CAACAAGTAC CGCGTATCTG GCGTGACAGT CAGCAAAGTT GCAGAGCGGG TGCAGTATTA CGACAGCGAC GGCAAACTGG TCACTGAATC CTTTAAGGAT TACACCCGTA AAACCATGGC GAAACAGTTC AGTTCGCTTG ATGAGTTTGT CAGGCGTTGG AATGACGCCG ACCGTAAACA AGCGGTAATC GATGAGCTGG CGCAAGAGGG GATTATTTGG TCAGCACTTG AGGAAGAAGT GGGCAAAGAC ATGGATCCCT TCGATATAAT TTGCCATGTC GTGTATGACC AACCGCCGTT AACCCGCGCT GAACGGGCTA ATAACGTTAA AAAACGCAAT TATTTCACTA AATATTCCGA CACGGCCCAA GCCGTACTCG AGAATTTATT GATAAAATAT GCCGATGTGG GCGTGCAAGA AATTGAAAAT CTGCAAGTGC TTAAAGTTCA GCCATTTAAT GACATAGGCA GTTTAAGTGA CATCATCAAA AAAGGCTTTG GTGGCAAACC CCAGTACGAA CAAGCCATTA GTGAGTTAGA AGCCGAAATC TACCAAATAG CACAATAA
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Protein sequence | MVNHNASINK AKLTETDIIT KFIMPAVKNA GWDDMTQIRQ EVKLRDGKVI VRGQMGMRTT VKSADIVLYH KPSMPLAVIE AKANKHEVGK GIQQALDYAH LLDVPFVFAS NGDGFIFHDK THAITNSPGT PEAHNLESEI RLEDFPSPEE LWAKYCIWKG YTAAQLPIIN EAYYDDGTGK HPRYYQLQAI NKTVEAISSG KDRVLLVMAT GTGKTYTAFQ IIWRLWKSRA KKRILFLADR NILVDQTRIN DFQPFGTSMT KITGRTVDPA YEIHLALYQA LTGPDESQKA FKQVAPDFFD LIIIDECHRG SASDDSAWRE ILEYFSSAAQ VGLTATPKET DEVSNSDYFG DPLYTYSLKE GIDDGFLAPY KVVRVDIDVD LQGWRPTKGQ IDNNGEVIED RIYNQKDFDR TMVIDERTQL VAETITNYLK RTDPMGKTIV FCNDIDHAER MRRALANLNP EQMAKNDKYV MKITGDDELG KAQLDNFINP KKAYPVIATT SELMTTGVDA KTCKLVVLDQ NIQSMTKFKQ IIGRGTRIDD KYNKLWFTIL DFKKATELFA DERFDGTPEK IIKVTPEDIE DEDVDIDAAD DEPNEEDVQG DIQDEQQGEG QDNTKNDPQG DGSFDEGEWD EGEIRKVNKY RVSGVTVSKV AERVQYYDSD GKLVTESFKD YTRKTMAKQF SSLDEFVRRW NDADRKQAVI DELAQEGIIW SALEEEVGKD MDPFDIICHV VYDQPPLTRA ERANNVKKRN YFTKYSDTAQ AVLENLLIKY ADVGVQEIEN LQVLKVQPFN DIGSLSDIIK KGFGGKPQYE QAISELEAEI YQIAQ
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