| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1951 |
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| Symbol | |
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| ID | 5372414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2332795 |
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| End bp | 2334087 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640830155 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001366157 |
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| Protein GI | 153000476 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000646207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC TACCAAAGGG AGTCGAAAAG CTCCCTTCTG GCATCCATAT TCACGGTGAA
ACGGTACGCA TTGATTTTCG TTACAATGGC GAACGTTGCC GTGAGCCATT GGCTGGCCAT
TACAAGATCA CTAAGTCTAC GATTAAGTAT GCTGAAAATA AGCGTACAAC GATTCTGACT
GAGATAGCCG AGAATCGATT CGACTATCTC GCCCACTTTC CTAACTCAGC AAAGGCGGCA
AGGTTTGCGG GGATCTGCCA GAAAAAACGT TATGTGGCAG AAGCGGTTAA GCTTTGGCTG
GATGTGCAAG AAGCTACAAA AGCCCAAAGC ACATTCAAAA ATTACAAAGT TAAAGCACAG
CACGTACTCA ATAAATGGGG AGACAGAAAG CTTACTGATA TCACCAAATC ACAAATGGAA
CTCTTTCAAG TTGAATTGCT GAAAAGTGGC CTAGCGCCAA AAACCGTAAA TGACATTTTC
ACTATCATTC GGGGCGTATG GTCAGAAGCT TTTCATGAAG GCACGCTCAA AACCAATCCA
CTTGATCGAG TGAGAAATAT CGAACGTGAC AACCTAGAAG AAACAGCTGA TCCGTTTACT
CGCGAAGAAC TGCTGTGCAT TGAGACGATA GACACATCAC GTCAGTGTGA TATCAACATG
ATCATGTTCT GGTGCTGGTC TGGATTATCA CTCTCAGAGA TCATCGCGCT GGCTTGGGAG
GATATAGATA CTGAGACTTG GACGGTGAAA GTACAGCGTG CGAAGGTGTT AAATCAATAT
AAGGTACCTA AAGAGCGTGG TCGCATACGT GTTATTGAGT TATTAGAACC TGCAAAGTTT
TGGCTGCAAC GCCAAATGGA ACACACCTTT AATCAGCATG CGACTAAATA CACCATAAAA
CAACGTGACA ACATTACGAA TAAACAAGAG AGTATTAGGC TCGTTTTTCT CAATGGGAAA
AGTGGTTTGC CTTGGTATGA TCATTCTGTT CGTCGCTGGT TTACCGGTAT TTTAAATGGT
GCCAAGTTAC GCCATCGTGG ACCGAATCAA TGTCGCCATA CCTTTGCAAG TCAGATGCTT
TCTAACTACG TACCACTTGA ATGGGTTGCA AGACAATTAG GCCATAGCGA TACCACAATG
ATTAAAAAAC ATTATGGCAA ATGGATACCT AAGGACTCAC TAAGAATGGC TAATCGTATC
TCTGAAATGA TGGGTTTTAG TGAGGATAAT AACGGACTAG AACACCCTGA AATGGTCCCA
AATAGGTCCC AGAGCAACAA AGGGAACCAG TAA
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| Protein sequence | MIELPKGVEK LPSGIHIHGE TVRIDFRYNG ERCREPLAGH YKITKSTIKY AENKRTTILT
EIAENRFDYL AHFPNSAKAA RFAGICQKKR YVAEAVKLWL DVQEATKAQS TFKNYKVKAQ
HVLNKWGDRK LTDITKSQME LFQVELLKSG LAPKTVNDIF TIIRGVWSEA FHEGTLKTNP
LDRVRNIERD NLEETADPFT REELLCIETI DTSRQCDINM IMFWCWSGLS LSEIIALAWE
DIDTETWTVK VQRAKVLNQY KVPKERGRIR VIELLEPAKF WLQRQMEHTF NQHATKYTIK
QRDNITNKQE SIRLVFLNGK SGLPWYDHSV RRWFTGILNG AKLRHRGPNQ CRHTFASQML
SNYVPLEWVA RQLGHSDTTM IKKHYGKWIP KDSLRMANRI SEMMGFSEDN NGLEHPEMVP
NRSQSNKGNQ
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