Gene Shew185_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1927 
Symbol 
ID5370417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2297043 
End bp2297330 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content43% 
IMG OID640830130 
Product50S ribosomal protein L25 
Protein accessionYP_001366133 
Protein GI153000452 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0361205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACA CTATCCAAGC ACAAACCCGC ACTGAAATAG GGAAAGGTTC GAGCCGCCGC 
CTACGCCATG CTGGTAAAGT ACCTGCTGTT ATTTATGGCC AAGGCAAAGA GCCAGTTTCT
ATTGTTTTTG ATCACAAAGA TATCATCAAC ATTCAAGCTA ACGCTGATTT CTACACTTCA
ACTTTGACTA TCGTTGTTGA TGGCAAAGAA GTGGGTGTAC GTGCACAAGC TATGCAACGC
CACGTGTTCA AACCACTTAT TGAACATGTT GACTTCGTTT ACGCTTAA
 
Protein sequence
MSYTIQAQTR TEIGKGSSRR LRHAGKVPAV IYGQGKEPVS IVFDHKDIIN IQANADFYTS 
TLTIVVDGKE VGVRAQAMQR HVFKPLIEHV DFVYA