Gene Shew185_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1925 
Symbol 
ID5370489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2295806 
End bp2296354 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID640830128 
Producthypothetical protein 
Protein accessionYP_001366131 
Protein GI153000450 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0363719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTTGA TATGTCCTGC CCGTAGGCAG TTATTGTTAG GCCTGAGTGG TGTGGCATTA 
TGTTCTCTTA TTCCCTCAAA AGCAGTAGCC AGTCGTTCAA CCAAAGGGAT CCGCGAGTTA
AGTCTGTTTA ATCGCCATAC CGGTGAGCGC GATGACGGCA GTTATTGGGT TGATGGTCAT
TATCAAAGCA AGGTATTAAA CGATTTTAAT CATTTACTGC GGGACCATCG CCAGAATGTG
GCGGCGCCCA TGGATAAACG TTTATTCGAT TTGCTCTATT CCCTTAAAAC GACTTTGAAT
GTCGACGATG AAATCCATGT GATTTCTGGT TACCGTTCAC CCAAAACCAA TGCCATGCTT
GCGAGCCACA GTGGCGGTGT CGCAAAAAAG AGTTACCACA TGCGCGGCAT GGCTATGGAT
ATCGCGATCC CAAGCGTTAA GCTTAAAACC CTCAGAGAAG CGGCTTTATC CCTAAAACTG
GGTGGAGTGG GCTATTATCC TAACTCTGGC TTTGTGCATG TCGATTGTGG GCCGGTACGA
CACTGGTAG
 
Protein sequence
MTLICPARRQ LLLGLSGVAL CSLIPSKAVA SRSTKGIREL SLFNRHTGER DDGSYWVDGH 
YQSKVLNDFN HLLRDHRQNV AAPMDKRLFD LLYSLKTTLN VDDEIHVISG YRSPKTNAML
ASHSGGVAKK SYHMRGMAMD IAIPSVKLKT LREAALSLKL GGVGYYPNSG FVHVDCGPVR
HW