| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1915 |
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| Symbol | |
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| ID | 5370775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2282659 |
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| End bp | 2283795 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830118 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001366121 |
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| Protein GI | 153000440 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0904727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACAC ATGCAGCCCT ATATGAACAG GGAAAGGCGC GCTTAGATGC GTTACGCCAA
TTCGCTCCCC GTCAACAACA ATCGCTGATT GAGAAAATGC AACAGCACGG CATTAGTCGC
CGTGATTTTA TGAAGTGGAG TGCCATGGTG ACGAGCATGC TCGCATTGCC GCTCCCTTTT
AGTAACTTAG TAGCCGAAGC TGCTGAATTA GCCGACCGTG TACCCTTAAT CTGGTTACAC
ATGGCCGAAT GTACTGGCTG CTCAGAATCC TTAATTCGTA CCGATACCCC CAATCTAGAT
TCACTGATTT TTGATCATAT CTCCTTGGAA TATCACGAAA CCTTAATGGC TGCTGCAGGT
TGGCAAGCCG AAGAAAACCT CGAAAATGCA CTCGAAACCT ACAAGGGCCG CTATTTACTG
GCCGTTGAAG GGGCAATTCC GACCGCCAAT AACGGCAGTT TCCTCACTGT GGGCTGTAAA
GGCCACACAG GATTAGAAAT CATCAAACAT GCTGCAGAAG GCGCCGCCGC GATTATCTCT
GTCGGCACTT GTGCGGCATT TGGTGGCGTG CAAGCCGCCT ATCCAAACCC AACGGGTGCG
AAAGGCGTGC ACGAAGTGGT CAGTAAACCC GTCATTAACT TAGGCGGTTG CCCACCGAGC
GAAAAGAACA TAGTCGGCAC TTTGATGTAC TTCATCATGT TCGGCAAATT ACCTGCACTG
GATATGTTTA ACAGACCTAA ATGGGCTTAC GGCGCACGGG TACACGATAA CTGTGAACGT
CGCGGCCGCT TTGATGCCGG TGAATTCGTT GAAGAATTTG GCGATCACGG CGCGAAAGAA
GGCTACTGCC TGTATAAAGT CGGTTGTAAA GGTCCATACA CCTATAACAA CTGCCCAACC
GAGCGCTTTA ACCATCACAC CAGCTGGCCA GTACTTGCTG GACACGGTTG TATGGGCTGC
TCAGAACCTA ACTTCTGGGA TGACATGGCC GACTTTGAAA AACCCCTTGG CCGTCAACTC
CTCCATGGAT TGGATGCGAC CGCAGATACT ATTGGTGCGG TGATTTTAGG CGCGACGGTG
GTGGGCATTG GAGCCCATGC CGTTGCCAGT ATTTTTGCCA AACCGCTGGA GGAATAA
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| Protein sequence | MDTHAALYEQ GKARLDALRQ FAPRQQQSLI EKMQQHGISR RDFMKWSAMV TSMLALPLPF
SNLVAEAAEL ADRVPLIWLH MAECTGCSES LIRTDTPNLD SLIFDHISLE YHETLMAAAG
WQAEENLENA LETYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEIIKH AAEGAAAIIS
VGTCAAFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL
DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT
ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT IGAVILGATV
VGIGAHAVAS IFAKPLEE
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