| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1906 |
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| Symbol | |
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| ID | 5370615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2271113 |
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| End bp | 2272252 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830109 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001366112 |
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| Protein GI | 153000431 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.306106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAC TAAAACACCT CTATCAAGGC TTTCGCGATC CCCAAACGAT TGCCAATTTA
GCGCGGGATA TTCAGGTAAC CGCTAAATTG GTTAAGCAAC CAATCAATAT CATGGAAGTC
TGTGGCGGCC ATACCCACAC TATTATGAAA TACGGCTTGC TGGATTTACT GCCTGATAAT
ATTGAGTTTA TCCACGGTCC AGGTTGTCCT GTGTGCATTA TGCCGAAAGA GCGCATTGAC
CAAGCGGCGG CGCTAGCCTC CCAAGAAAAT ATTATTCTTG TGACGCTGGG CGATATGATC
CGTGTGCCCG GTTCTAAGGG GTCCTTAGCC AGTTTTAGGG CGAAAGGCTG CGATATTCGG
CCGATTTATG ATCCCTTAGA TACGCTCAAA ATTGCCCGCG ATAATCCCGA TAAAACCGTG
GTGTTTTTCG CCATTGGCTT TGAAACCTCA ACCCCAATGA CAGCAATTTT ATTGCAGCTG
GCCGAGCACG AAAAACTCGA AAATCTGTTA TTCCATATTA ATCATGTATT AGTGCCGCCC
GCGATTGATG CCGTGATGCA CGACCCGAAA GCCAGAGTGA ATGCCTTTAT TGGCCCCGCC
CATGTGAGCG TGATCAGCGG CGCCAAAATC TATCGCAGCA CAGTCGAAAA CTATGGCACG
CCAGTGGTCG TCGCAGGATT TGAACCCGTT GATGTGATGG AGTCTATTTT ACGGATTGTG
CGCCAAAAAG CCGCGGGCAA AGCGGAGCTC GATATCCAAT ACAGCCGCGC GGTATCGGAA
GGTGGTAACC TCACGGCGCA GGCCAAAGTG AATCAATTCT TTAATGTCAG ACCACAATTT
CGCTGGCGTG GCCTTGGCCC AATCCCCAAT TCAGCGCTGC AGCTCAAACC CGAATATGCT
CATAGAGACG CCGAACTGCG CTTTAAAGAC CGCTTACCCG TGAAGGAAAT TGACGATCAC
AAAGCCTGCC AGTGTGGCGA CATTCTTCGT GGGCTTGCTA AACCAAAGGA CTGTAAAGTT
TTTGGCCGCG GCTGCAATCC CGAAACGCCC CTAGGCAGCT GCATGGTCAG CTCCGAAGGC
GCTTGCAACG CTTATTACCG CTATCAAGGT ATCGATATCA AGGAGCCACA TCATGGCTGA
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| Protein sequence | MLELKHLYQG FRDPQTIANL ARDIQVTAKL VKQPINIMEV CGGHTHTIMK YGLLDLLPDN
IEFIHGPGCP VCIMPKERID QAAALASQEN IILVTLGDMI RVPGSKGSLA SFRAKGCDIR
PIYDPLDTLK IARDNPDKTV VFFAIGFETS TPMTAILLQL AEHEKLENLL FHINHVLVPP
AIDAVMHDPK ARVNAFIGPA HVSVISGAKI YRSTVENYGT PVVVAGFEPV DVMESILRIV
RQKAAGKAEL DIQYSRAVSE GGNLTAQAKV NQFFNVRPQF RWRGLGPIPN SALQLKPEYA
HRDAELRFKD RLPVKEIDDH KACQCGDILR GLAKPKDCKV FGRGCNPETP LGSCMVSSEG
ACNAYYRYQG IDIKEPHHG
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