| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1905 |
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| Symbol | |
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| ID | 5372604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2270104 |
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| End bp | 2271120 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830108 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_001366111 |
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| Protein GI | 153000430 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.224357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA CGCTAAAAGA TAAATCCATT CAACTCAGCC ACGGCGGTGG CGGCAAAGAA
ATGAATAAAC TGATCCGTGA TCTGTTTTTT GCCGAATTTG ATAATCCAAT CCTTCGTTGC
GAAGAAGACG CTGCCAAACT CGATTTACAC GGCGCCAACG CCTTTACCAC TGACTCTTTT
ACCGTTTCAC CTTTGTTTTT TGCCGGCGGC GATATCGGCA AACTTGCTAT CGCTGGCACA
GTCAACGATC TCGCTATGAT GGGCGCAGAG CCTCAATATC TGAGCTGTAG CGTGATCATA
GAGGAAGGCT TTTCTATCAA TGACTTAACG ACTATTGTCC GCAGCATGGC AAAAGAGCTC
AAACAAAGTG GCGCGCGGAT TGTCTGCGGC GACACTAAAG TTGTGCCCAA GGGCTGTGCC
GATGGTTTAT TTATTAATAC CTCAGGCATT GGTCGCATCC TGCGTCCCAA CATCTCAGCG
GCAAACATTG CAGTGGGCGA TGCCATTATC GTCTCCCGTG ATATTGGCTG CCACGGCGCG
GCGATTTTAA TGGCGCGTGA AGGACTCACG CTCGAATCGG CATTGCAAAG TGACTGCGCG
ACGCTCTGGC CGATAGTCGA GCAATTGATC GCCGCCAATA TTCCCATTCA TGCGATGCGC
GATGCGACTC GCGGTGGCTT ATCGGCTGTG CTCAATGAAT GGGCCGTCGC CTCCAATGTC
GGCATTACTG TCAATGAGGC CAGTATTCCC GTCAGCGATG AAGTCAAAGG CCTGTGTGAA
CTCTATGGTT TCGAAGCCAT GGATCTTGCC AACGAAGGCA CTTTCATCCT CGCCGTCCCC
AACGACATCG CCTTAGGTGC GCTCGAGATC ATGCAACGCT TTGGCCGCTG TGAGCATGCA
GCGATAATCG GCACAGTGAG TGAGGATTTA GTGGGGAAAG TCGTACTAAG AACGCCATGG
AATACTAAGC GTTATCTCGA TCTTCCCCAG GGTGAACTGC TGCCAAGGAT TTGCTGA
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| Protein sequence | MADTLKDKSI QLSHGGGGKE MNKLIRDLFF AEFDNPILRC EEDAAKLDLH GANAFTTDSF
TVSPLFFAGG DIGKLAIAGT VNDLAMMGAE PQYLSCSVII EEGFSINDLT TIVRSMAKEL
KQSGARIVCG DTKVVPKGCA DGLFINTSGI GRILRPNISA ANIAVGDAII VSRDIGCHGA
AILMAREGLT LESALQSDCA TLWPIVEQLI AANIPIHAMR DATRGGLSAV LNEWAVASNV
GITVNEASIP VSDEVKGLCE LYGFEAMDLA NEGTFILAVP NDIALGALEI MQRFGRCEHA
AIIGTVSEDL VGKVVLRTPW NTKRYLDLPQ GELLPRIC
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