| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1904 |
|---|
| Symbol | |
|---|
| ID | 5372603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2269751 |
|---|
| End bp | 2270104 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640830107 |
|---|
| Product | hydrogenase nickel insertion protein HypA |
|---|
| Protein accession | YP_001366110 |
|---|
| Protein GI | 153000429 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0320929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAT ATTCGATTGT GAGTGCCCTG ATTGAGCAAT GCGAGCAGCA CGCGCTGGCC
AATCACGCCG CTAAAATCAC CCGAGTGGAT ATCAAACTAG GAGTCATGAG CGGGGTTGAA
CCTAGCCTGC TACAAACCGC CTTCGATACC TTTAAGCTCG ATAGCATTTG CAAAGCTGCC
CAGCTCAATA TCCAAATTCA GCCGCTAGTA ATACTTTGCC AAGACTGCCA GAGCGAATCC
GTGCTGAGTG AACGCACCGT CGTCTGCCCA ACGTGTCAAA GCTATCGCAC CCGCGTACTC
GATGGCGAAG ACATGCTACT GATGCAACTT GAAATGGAGC AGGATGAAGA TTAG
|
|---|
| Protein sequence | MHEYSIVSAL IEQCEQHALA NHAAKITRVD IKLGVMSGVE PSLLQTAFDT FKLDSICKAA
QLNIQIQPLV ILCQDCQSES VLSERTVVCP TCQSYRTRVL DGEDMLLMQL EMEQDED
|
|---|
| |