Gene Shew185_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1903 
Symbol 
ID5372618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2268652 
End bp2269593 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content48% 
IMG OID640830106 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_001366109 
Protein GI153000428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00286987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAAGAC AGCCCAAACA TTTTGACCGT CGCTTTAAAC TCGCCTTATT ACACCCTAAA 
TACTGGGCCA CTTGGTTGGC GATTGGTCTA TTAGTGATTT TCGGACTCAT GCCCGCATGG
CTGCGTGATC CCATTGCAAG ATTATTGGCA AGATTAGTGA TGCCGATTGC CAAAAAGCCC
ATTAGTGTTG CGAGAGCCAA CTTAAGAGCG TGCTTTCCTG AACAATCTGC CGCCGAGATC
GAAGTGTTAA TCCGTGAGAA CGTACAAAAC TTCGTTTTAG TCTTGTTAGC TCAAGGCGAA
TTGCTGGTGC GCTCAAAAGC GCATTTGCGT CGTCGAGTGA ATTTAATCGG CTTTGAGCAT
GTGACGAAAG CACAAGCTGC GGGGCAACCG ATCATTTTCA TCATGCCCCA TGTGTGGCCA
ATCGATTATG CTGGTTTACG CCTTAACCTT GAGTTGCCTA TGGTGACTAT GGCCAAAGCC
CATAAGAATG GCTTATTCAA TTGGTTTAGT AATCGTGTGC GCAGCAGTTG TGGTGGCCAT
GTATACATGC GCGAGGCGGG AATTCGTGCG TTGTTAGCTG AGCTTAAGCG CGGTAACAGT
TTCTTTTATC TACCCGACGA AGATTTAGGC CCAGAACAAA GCGTGTTTGC GCCATTTTTA
GGCACAGTGA AAGCAACTCT GCCTGTCGTT GGGCGTTTAG CACAGGCGGG TAATGCCCAA
GTGCTACCTG TAAAGATTGG TTACAACCAA GCGACACGTC AGTTTGATCT CACTGTGATG
ACGGCCGTTG CGCCTGAAGA CATGGTAGGC AAGGAAAACG AGGCGTTGGC GCTGAACAAA
GTGGTCGAGC AAGTTATATT AGCTTATCCA GAGCAATATA TGTGGTTCCT ACGGGTGCTC
AAGACGCGCC CAGAGGGGGA AGCTTCAATC TACGGTCTAT GA
 
Protein sequence
MSRQPKHFDR RFKLALLHPK YWATWLAIGL LVIFGLMPAW LRDPIARLLA RLVMPIAKKP 
ISVARANLRA CFPEQSAAEI EVLIRENVQN FVLVLLAQGE LLVRSKAHLR RRVNLIGFEH
VTKAQAAGQP IIFIMPHVWP IDYAGLRLNL ELPMVTMAKA HKNGLFNWFS NRVRSSCGGH
VYMREAGIRA LLAELKRGNS FFYLPDEDLG PEQSVFAPFL GTVKATLPVV GRLAQAGNAQ
VLPVKIGYNQ ATRQFDLTVM TAVAPEDMVG KENEALALNK VVEQVILAYP EQYMWFLRVL
KTRPEGEASI YGL