Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1891 |
Symbol | |
ID | 5369964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2255894 |
End bp | 2257567 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830094 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001366097 |
Protein GI | 153000416 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0198205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCAGC CTTGGATTAA TCATTTGCCA AAAGATGTGC CTGCTGAAAT TAATGTGGAG CAGTACTCAT CGCTTGTTGA TATGTTCGAA ACAGCGGTGG CTAAGTATGA AGACCAACCT GCATTTATCA ACATGGGTGC CACGCTAACC TATCGTAAAT TGGAAGAACG CAGCCGTGCA TTCGCCGCGT ATCTACAAAA TGAATTAAAG CTTGAAAAGG GCGATCGTGT CGCCTTAATG ATGCCAAATC TGTTGCAATA CCCGATTGCA CTGTTTGGTG TTTTACGTGC CGGTATGGTG GTCGTTAACG TTAATCCGCT ATATACCCCG CGCGAACTTA AACATCAGTT GATTGACTCG GGCGCCAAAG CCATAGTTGT AGTGTCAAAC TTCGCCCGCA CCTTGGAAGA AGTTGTCGAA CAAACGCCTG TTGAAAGCGT CATTATCACC AGTTTAGGTG ACCAATTAAG TGCGCCAAAA CGCACCTTAG TGAACTTTGT GGTGAAGTAC ATTAAGAAGC TCGTCCCTAA ATACGATTTA CCGCACGCCT TATCGATGCG CGATACCTTA TCAGCTGGTC GTCGCATGCA ATACATCAAG CCTGAAGTGA CTAACGACGA TTTAGCGTTT TTGCAGTATA CAGGTGGCAC AACTGGGGTG TCTAAAGGCG CGATGTTGAC CCATGGCAAT ATTGTCGCCA ACGTATTGCA GGCCGATGGC GCTTATTCAC CTGCCTTAAA CGATGGCAGC GAGTTTGTTG TAACGGCTTT GCCGCTGTAT CACATCTTCG CGTTGACAGT TAATTGCCTG CTGTTTTTGC ACAAAGGCAG CCAGAACTTA CTTATCACCA ATCCTCGTGA TATCCCAGGA TTTGTGGCCG AGTTGAAAAA GTATCCTTTC ACTGCATTGA CTGGGGTAAA CACCTTGTTT AACGCGTTAG TGAACAGTGA TGATTTTTCC CAGTTGGATT TTTCGCGCTT AAAACTCTCT ATCGGTGGCG GCATGGCGGT ACAAAAAGCC GTGGCGGATA AATGGCAAGC TATCACTAAG ACCCGTTTAC TCGAAGGTTA TGGTCTGACC GAAGCCTCAC CTTTATTAAC CTGTTGTCCA TATAATTTAG ATGGTTACAA CGGTTCAATT GGTTTCCCTG CACCTTCGAC ACTTATTCAA ATCCGTGACG ATGACGGAAA GGTATTAGCC CAAGGCGAAA CCGGTGAACT GTTTGGTAAG GGCCCGCAAG TGATGAAAGG CTATTGGCAA CGTCCTGAAG AAACTGCCAA AGTGATTGAC ACTGACGGCT GGTTAGCCAC GGGCGATATT GGTTACATGG ATGAGAAAGG GTTCTTCTAT ATTGTCGATC GTAAGAAAGA CATGATCTTA GTTTCAGGCT TTAACGTATT CCCCAATGAA GTCGAAGAAG TGGTCGCACT GCATCCTAAA GTGATTGAAG TGGCTGCTGT TGGTGTACCA AACGACGCCA GTGGTGAGTT AGTGAAGGTA TTTGTGGTGG CAAAAGATAA ATCTTTAACC GCTGAAGACA TCATTAAGCA CTGCCGTATT CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC AACGTGGGTA AGATCTTGCG ACGAGAGCTT AGAGACGAAG CTAAGCGCGC GTAA
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Protein sequence | MDQPWINHLP KDVPAEINVE QYSSLVDMFE TAVAKYEDQP AFINMGATLT YRKLEERSRA FAAYLQNELK LEKGDRVALM MPNLLQYPIA LFGVLRAGMV VVNVNPLYTP RELKHQLIDS GAKAIVVVSN FARTLEEVVE QTPVESVIIT SLGDQLSAPK RTLVNFVVKY IKKLVPKYDL PHALSMRDTL SAGRRMQYIK PEVTNDDLAF LQYTGGTTGV SKGAMLTHGN IVANVLQADG AYSPALNDGS EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF TALTGVNTLF NALVNSDDFS QLDFSRLKLS IGGGMAVQKA VADKWQAITK TRLLEGYGLT EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ IRDDDGKVLA QGETGELFGK GPQVMKGYWQ RPEETAKVID TDGWLATGDI GYMDEKGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK VIEVAAVGVP NDASGELVKV FVVAKDKSLT AEDIIKHCRI HLTGYKVPKL VEFRDELPKT NVGKILRREL RDEAKRA
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