Gene Shew185_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1890 
Symbol 
ID5369963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2254826 
End bp2255692 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content49% 
IMG OID640830093 
Productalpha/beta hydrolase fold 
Protein accessionYP_001366096 
Protein GI153000415 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0538139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAAT CTCTCGCCCC CCAAAATCAA ATCGAATTTG TATTACCTCA TATTAAGGTC 
GCGGGCCGAT TATGGGGGGC GAAGGATAAA CCTTTATTAC TGGCCTTACA TGGCTGGTTA
GACAACGCCA ACAGTTTTGA GCCCTTAGCG GCACATTTAC TCGATTATCA AGTGCTCGCC
ATTGATTGGC CTGGACACGG CTTTTCGGCG CACAGGCCGG GGCATTATCC GCTGCATTGG
ATTGATTACT TGTATGATTT GGATGCGCTA TTAACGGCAT TACCGCAAAT GCCTGTGGCC
ATGGTGGGGC ATTCGCTCGG TGGCATTATT GCCTCGGCGT ATACGGCGAC CTTTCCTGAA
AAGGTCAACA AGCTGGTATT GATTGAAGCG TTAAGTCCTT TGTCAGAGTC GCCAACGCAG
GCGAAAGCAC GATTAAGGAA AAGCTTCTAT CAACACGAGA AGTATTTAAC CCAGAAGCAT
GGGCAGGCAA AAATTTACGA CAGCATAGAG ACCGCAGTGC GGGCGAGGGC GCATCTAACG
GGACTTGCCG AACCTTGGTG CCGTCTGTTG CTCGAGCGTA ATATGCAACC CGAAGGTGAG
GGCATAGGTT GGCGCAGTGA TCCTCGATTG AGATTAGATT CACCCCAACG GCTAACCTTC
GCCCAAGTTG ATGCCTTGAT GCAGGACATC AATATTGAAA CCTTATTAGT GTGTGGCAAA
CAAGGATTTA GCCAGTTGCA GACCGCCATA CCTAAGGCGC GAACTTGGTT CAAACATTTG
TCTGAACATA TAATCGAGGG CGATCATCAT GTTCATATGG ACAATGCTGA AGGCGTTGCC
CGCTTGATCC GCGAATTCGT TAAATAG
 
Protein sequence
MWQSLAPQNQ IEFVLPHIKV AGRLWGAKDK PLLLALHGWL DNANSFEPLA AHLLDYQVLA 
IDWPGHGFSA HRPGHYPLHW IDYLYDLDAL LTALPQMPVA MVGHSLGGII ASAYTATFPE
KVNKLVLIEA LSPLSESPTQ AKARLRKSFY QHEKYLTQKH GQAKIYDSIE TAVRARAHLT
GLAEPWCRLL LERNMQPEGE GIGWRSDPRL RLDSPQRLTF AQVDALMQDI NIETLLVCGK
QGFSQLQTAI PKARTWFKHL SEHIIEGDHH VHMDNAEGVA RLIREFVK