Gene Shew185_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1884 
Symbol 
ID5372959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2249588 
End bp2250493 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID640830087 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionYP_001366090 
Protein GI153000409 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.314247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TGACTGATTT TGAACGCTAT GTTATCGAAG AGAAAGGCAC TGAACGCCCC 
TTTAGTGGTG AGTATTATGA TCATGATGCC AAGGGTTTGT ATTTATGCAA AAAATGCCAT
GCGCCCTTGT ACCGCTCTGA GCATAAATTT AATGCCCATT GTGGCTGGCC AGCCTTCGAT
GATGAAATTG CCGGTGCCGT AACGCGCCAT GTCGACGCCG ATTGCCGCAG AACCGAAATT
GTCTGTAGCC AGTGTGGCGG CCATTTAGGC CATGTTTTTG AAGGTGAGAT GTTAACACCC
AATAATATTC GTCACTGTGT TAACTCCGTT TCTATGGTTT TTAAAGGGAT GGATGATGCT
GTTGAACCTG CATCGAACAG CTTTGCAACT TTTGGCGCTG GGTGTTTTTG GTGCGTCGAG
GCGATCTTTC AAAGCCTAAA AGGCGTGGTG AATGTCACTT CTGGCTATGC CGGCGGTGAT
GCCCATGATG CCGATTATAA ATCCGTTTGC TCGGGCCAAA CTGGCCATGC AGAGGTTGTG
CATGTCGAGT TCAGCCCAGA GGAAATTGAT TTTACGACGC TGTTGCAGGT CTTTTTTGAG
AGTCATGATC CGACTACGCT CAATCGTCAA GGCAATGATA AGGGGCCACA ATATCGCTCT
GTGGTGTTTG CCCATAATGC CGAGCAGATT GAGCAAACCA CCGCTATGTT GACTCAGTTA
GCGGCGGCTA AGGTTTTTGA TGCGCCTATT GTGACCCAAG TGTCAGCATT TGAGACGTTT
TATCCCGCTG AAAATTATCA CAATGATTAC TTTGCTTTAC ACGGTGAGCA ACCTTACTGT
CAGATGGTCG TGCGCCCTAA AGTCGATAAA GTGAAAGCCT TGTTTGCACG ATTGCAAAAA
GCTTAA
 
Protein sequence
MNKLTDFERY VIEEKGTERP FSGEYYDHDA KGLYLCKKCH APLYRSEHKF NAHCGWPAFD 
DEIAGAVTRH VDADCRRTEI VCSQCGGHLG HVFEGEMLTP NNIRHCVNSV SMVFKGMDDA
VEPASNSFAT FGAGCFWCVE AIFQSLKGVV NVTSGYAGGD AHDADYKSVC SGQTGHAEVV
HVEFSPEEID FTTLLQVFFE SHDPTTLNRQ GNDKGPQYRS VVFAHNAEQI EQTTAMLTQL
AAAKVFDAPI VTQVSAFETF YPAENYHNDY FALHGEQPYC QMVVRPKVDK VKALFARLQK
A