| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1882 |
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| Symbol | rbgA |
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| ID | 5370024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2247278 |
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| End bp | 2248219 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830085 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_001366088 |
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| Protein GI | 153000407 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.140157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC AGTGGTATCC AGGGCATATG CACAAGGCAC GCAAAGAGAT TGAAGAGGCA
ATGCCTCAGG TCGATCTTGT TATCGAAGTG CTGGACGCGC GTATTCCCTA CAGTAGCGAA
AACCCCATGG TGGCTCAGCT TCGAGGCGAC AAACCTTGTA TCAAACTGCT CAATAAATCT
GATCTGGCCG ATCCAGAGAT CACTGCGCAA TGGATTGAAT ACTTAGAACG CGAACAAGGC
GTTAAAGCCA CCGCGATCAC CACACTGCAA GCGGCGATGG TGAAAAAGAT CCCTGATATC
TGCCGTAAGT TAGTGCCAAG TCGCGATAAA ACCGAAAAAG ACATTCGCAC TATGATCATG
GGGATCCCCA ACGTCGGAAA ATCCACCATC ATCAATACCT TAGCAGGCCG TGTTATCGCC
AAAACAGGTA ACGAACCTGC GGTGACCAAA ACCCAACAAA GGATCAATTT ACGTAACGGT
ATCGTGCTAT CGGACACCCC AGGGATTTTG TGGCCCAAAG TGGATAACGA AGCCAGCAGC
TATCGCCTTG CCGTCACTGG CGCCATTAAA GATACCGCAA TGGAATATGA AGATGTGGCC
CTGTTCGCCG CTAAGTATTT CTTAACCGCT TATCCAAAAG AGATTTGTGA GCGCTACAAT
CTCACTGAGT TACCAAAGGA TGACGTGGCT TTACTCGAAG CGATTGGTCG TAAACGTGGC
GCACTGCGTC CCGGTGGTCG CATCGATATG CACAAGGCAT CTGAGTTATT GCTGCATGAA
TACCGCTCAG GCAAAATCGG CCTACTCTCG CTAGAAACGC CTGCGATGGC CGAGCTTGAG
AAGATTGAAG TCGCCCGTAT CATGGCCATA AAAGAAGCCG AGAAAGAAGC CAAACTGGCT
AATGAAAAGC TGAAACGTTC AGGCAAACGC CATAACGACT AA
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| Protein sequence | MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMVAQLRGD KPCIKLLNKS
DLADPEITAQ WIEYLEREQG VKATAITTLQ AAMVKKIPDI CRKLVPSRDK TEKDIRTMIM
GIPNVGKSTI INTLAGRVIA KTGNEPAVTK TQQRINLRNG IVLSDTPGIL WPKVDNEASS
YRLAVTGAIK DTAMEYEDVA LFAAKYFLTA YPKEICERYN LTELPKDDVA LLEAIGRKRG
ALRPGGRIDM HKASELLLHE YRSGKIGLLS LETPAMAELE KIEVARIMAI KEAEKEAKLA
NEKLKRSGKR HND
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