Gene Shew185_1879 details

Gene Information

• Locus tag: Shew185_1879
• ID: 5369455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 2244462
• End bp: 2245250
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640830082
• Product: hypothetical protein
• Protein accession: YP_001366085
• Protein GI: 153000404

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.214675
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCAA AAATAAACTG GCTGATTAAT CATACGAGTC CTGGTGCGGT AGTGCTTCAG 
TCGTGGTTGA CACAAAATGA GATCAGCTCA TCTTTGGTGA GAAAATATGT GCAGAGTGGT 
TGGTTGTACA AGATAAGTGC GGGGGTTTAC GTTCGTCCTG AGTCAACAGG TAAGTTACAG 
CCTCATTGGG TTGAAGCGCT CAAGGCTGTG AATGAGCAGC TAAAGCTTCC TGTTCACCTT 
GCGGGAGTCA GTAGCCTAAC ACATCAAGGG CTTAGTCATT ATCTTCAACT AAGCAGCGAG 
CAAGTTTGGG TTGGCTGTCA AAGTAAGCTG GCGTTGCCAA AGTGGTTCCG CGAATTGGAG 
GAGCAAAACT GGCTTTTTTA CACCAGTAGC AAGCTGACCC AAACGTTAGA AAAAGACTTT 
ATTACTATAG GGGTAAACAA TAGGGAAGTT AAGGCAAGTT GTGCGGAGCT TGCAGCCTAT 
GAGGTCGTCA ATGCCATTGG TAAACATATC AGTTTTGAGC ATGCCGCGGA GCTGTTTCAA 
GGGTTAGTGA ATCTCAGCCC ACGTAGAATA CAGTCAATAC TGAATAGAAG TGAAGCCGTA 
CAAGCTAATC GCGTATTTCT CTTTTTAGGC CACTACTATC AACACCAGTG GAGCAAAAGG 
CTAGATGAGC AGCAAATCAC GCTCGGTGCG GGAAAGCGTC AGGTGGTGGC TCATGGCCGT 
TACGATAGGC GGTATCAAAT AACAGTGCCG GCATCGTTTA TTAAGACAGA AGAAAATCAA 
TATGAATAA 

 

Protein sequence

MSSKINWLIN HTSPGAVVLQ SWLTQNEISS SLVRKYVQSG WLYKISAGVY VRPESTGKLQ 
PHWVEALKAV NEQLKLPVHL AGVSSLTHQG LSHYLQLSSE QVWVGCQSKL ALPKWFRELE 
EQNWLFYTSS KLTQTLEKDF ITIGVNNREV KASCAELAAY EVVNAIGKHI SFEHAAELFQ 
GLVNLSPRRI QSILNRSEAV QANRVFLFLG HYYQHQWSKR LDEQQITLGA GKRQVVAHGR 
YDRRYQITVP ASFIKTEENQ YE