| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1832 |
|---|
| Symbol | |
|---|
| ID | 5372073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2198469 |
|---|
| End bp | 2200091 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640830035 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_001366038 |
|---|
| Protein GI | 153000357 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.018471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAA CTTGGGAGAA AGTTGTGAAA AATATCATCT TAGCCACAAG TCTGATGGCC
ACTATCTCAT TACCCGTCTT TGCTGAAACC GCATTTGTGC AAAGCCTCGA TCTCGCGCAA
TACCGAACCG ATGTTAAAAC CTTAGCCAGT GATGCCTTCG GTGGACGTGC GCCTTTATCA
GAAGGTGAGA ACTTAACTTT AGACTATTTA GTGAAAGCAT TTAAAGATAT GGGTCTCAAA
CCCGGATTTG GCGACAGTTA TCTGCAGGCC GTACCCTTGG CGCAAATTAG CGCAGATCAA
AACATGCAGC TTGATATTGG CGGACTTAAA TTTGCCAATG GCAGTGAATT TACCGCGAGA
ACCCAAAGAA TCGCCGAAAC CGTGAGCCTG AATAAAAGCG ATGTGGTGTT TGTCGGCTAC
GGGATCAACG CGCCCGAATA TGGCTGGAAT GATTACCAAG GGTTAGATGT AAAAGGCAAA
ACCGTTATTG TGCTTGTGAA TGATCCAGGC TTTGCGACTC AAGACCCAGC GGTATTTAAA
GGCAATGCCA TGACCTATTA CGGTCGCTGG ACTTATAAGT ATGAGGAAGC CGCGCGTCAA
GGCGCCGAGG CTGTGTTTAT AGTTCACGAA ACAGCGCCTG CCGCCTATGG CTGGGGTGTG
GTGCAAAACT CCAACACGGG CACTAAGTTC ACTCTGGTCG ATGCCAATAA TAACCAAGGC
CAAGTTGGCA TCATGGGTTG GGTACAGCAC GAAACCGCGC AAAAAATCTT TACTAAAGCA
GGATTGGATT TTGATACCTT AAAGCAGCAA GCAGCCAAGC CAAACTTTAA GGCGATCCCA
CTTAAGTTGA GCGCCCAGCT CACGTTAAAC AATAAAATTG AACGCGCTGA GTCTCATAAT
GTCGCGGCTT TACTGCCCGG CAAAATGCGC CCCGACGAAG TAGTAATGAT GCATGCCCAT
TGGGATCACC TCGGCACTGT GATTGAAGAC GGTAAGTCAG AGATTTTGAA CGGAGCGGTC
GATAATGCCA GCGGTGTGGC GGGGGTTTTA GCCTTGGCGC GTTACTTCAA ACAGCAAGCC
AAGACGGCGC CACTGGATCG CTCGGTGCTC TTCAGTGCCT TTACGGCGGA AGAAACCGGT
CTGATTGGAG CGCAGCATTT TGCTCAGCAT CCGAGTGTGC CAACGAAAAA CATCGTCGCC
TTTTTAAATA TCGATGGCAT GAATGTGAAC AAGGGCGTGG ATTACATTTT ACGTTATGGC
GAAGGCGTGT CTGAGTTAGA GCAATACTTA GACAAAGCCG CGAAGGCCCA AGACCGTTTA
GTTAAAGGTG ATCCAAGACC GCAGAATGGG TTGATGTTTA GATCGGACCA CTTTGCGCTG
GCACAACAAG GTGTACCTGG ATTGCTATTT ATGAGTCTTG GGGATACCGA TCCTGATTAT
ATCGCCCATA AATATCACAA GCCTGCCGAT GATTATGATC CAAGCTGGAA TTTAGGTGGT
GTAAGCCAAG ATCTAGATCT CATCGCCAGT ATGATTACCA GCTTAGCCAA TAGTACCGAT
TGGCCCCATT GGCTTGAGTC ATCTGACTTT AAAGCCAAAC GCGAGCAAGA TGGGCGTAAA
TAG
|
|---|
| Protein sequence | MIITWEKVVK NIILATSLMA TISLPVFAET AFVQSLDLAQ YRTDVKTLAS DAFGGRAPLS
EGENLTLDYL VKAFKDMGLK PGFGDSYLQA VPLAQISADQ NMQLDIGGLK FANGSEFTAR
TQRIAETVSL NKSDVVFVGY GINAPEYGWN DYQGLDVKGK TVIVLVNDPG FATQDPAVFK
GNAMTYYGRW TYKYEEAARQ GAEAVFIVHE TAPAAYGWGV VQNSNTGTKF TLVDANNNQG
QVGIMGWVQH ETAQKIFTKA GLDFDTLKQQ AAKPNFKAIP LKLSAQLTLN NKIERAESHN
VAALLPGKMR PDEVVMMHAH WDHLGTVIED GKSEILNGAV DNASGVAGVL ALARYFKQQA
KTAPLDRSVL FSAFTAEETG LIGAQHFAQH PSVPTKNIVA FLNIDGMNVN KGVDYILRYG
EGVSELEQYL DKAAKAQDRL VKGDPRPQNG LMFRSDHFAL AQQGVPGLLF MSLGDTDPDY
IAHKYHKPAD DYDPSWNLGG VSQDLDLIAS MITSLANSTD WPHWLESSDF KAKREQDGRK
|
|---|
| |