| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1831 |
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| Symbol | |
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| ID | 5372066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2197233 |
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| End bp | 2198258 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830034 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001366037 |
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| Protein GI | 153000356 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0533362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTAG AGTTATTACA AGCCGCTGCA CTGAATCTCA AAAAAGCAGT GCCTCTGATG
CTCAAACATA AAATTCCGAC CACCCCGGTT AACTATGCGC TTTGGTACAC TTATGTTGGT
GAACAGAATC CCGAATTAAA TCAACGACTC GATACCGTTA TCGCCCAGTA CAACACTTGT
CCTCCTGTGA GTAGCGAACT CTTATATCGC CAGTATGTTG CCGATCCCGT TGAACTCGAT
GTCCGCGAAA TGCGCCAGAA TCTGGATGCT ATGGTGACTG AGCTGTCCCA ATCGCTCAAA
GATACCAATC TGGATGCCAA TGAATTCCAG TCGCGCATCG AGAGTAATTT TGAAAAGCTC
AACCGCATCG AAGATGAGGG TTTTAGTGTT GAGCAAGTGC TCGATCTGGT GCGCAGTTTA
GTGAAAGAGT CGGACAATAT TCGCTCGAGC ACTGAGTTCT TTACCGGACA ATTGCAGAAA
GCGCAAACCG AAATCGATGC GCTAAAGAAA AAGCTCGAAC AGACAGAAAA AGATGTGCTC
TACGATGCGC TGACTGGCTG CTTTAATCGC CGCGCCTTCG ACAGCGATTT TGCCGGCATG
TTGGCCCAAG CGCCCTTAGG CACCTGCTTG ATCTTGGCCG ATATCGACCA TTTTAAAGTG
TTTAACGACA CCTACGGCCA CCAGCTCGGC GACCAAGTGT TACGCGCCGT GGCGAAACGG
CTGCAGGAAT CCTGCCGCGA TGGCGTGAAA CTGTATCGTT TTGGCGGTGA AGAATTTGTG
ATTATTGTGC CTAAAAGTCA GTTACGAATT GCAAGGCAAC TGGCCGAAGC CATGCGCCGT
GGACTCGAAA AGCTCAGTTT GAAAGACAGA CGTAAAGACG AGCGCATCAA TAATATCAGT
GCCTCATTTG GGGTTGCCCA ATGGCAAGAA AAACAAACGG GCATGCAATT AATTGCAGCG
GCAGATAAAT TACTTTATGA CGCTAAACGT TTAGGTCGAA ATCGCGTGTT ACCGATCAGC
AACTAA
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| Protein sequence | MSLELLQAAA LNLKKAVPLM LKHKIPTTPV NYALWYTYVG EQNPELNQRL DTVIAQYNTC
PPVSSELLYR QYVADPVELD VREMRQNLDA MVTELSQSLK DTNLDANEFQ SRIESNFEKL
NRIEDEGFSV EQVLDLVRSL VKESDNIRSS TEFFTGQLQK AQTEIDALKK KLEQTEKDVL
YDALTGCFNR RAFDSDFAGM LAQAPLGTCL ILADIDHFKV FNDTYGHQLG DQVLRAVAKR
LQESCRDGVK LYRFGGEEFV IIVPKSQLRI ARQLAEAMRR GLEKLSLKDR RKDERINNIS
ASFGVAQWQE KQTGMQLIAA ADKLLYDAKR LGRNRVLPIS N
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