| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1830 |
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| Symbol | |
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| ID | 5372065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2196299 |
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| End bp | 2196997 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830033 |
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| Product | sortase family protein |
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| Protein accession | YP_001366036 |
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| Protein GI | 153000355 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.27273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG GCAGAACGCA GCGATTTTTA GTGGTGGGAT TATTTTTAAT TGGCGCAACA
TTGTTAGGAA AGGGACTCTA TATGCAAGCT AAAGCACACT TTGCCCAGTA TTTGATTGAA
CAGGCGTGGA CTAAAACCTT AGCCGATGGA CAATCTCATA AGCCTTGGTC ATGGGCGGAT
ACTTATCCCG TGGCAAAGCT GTCGATTTAC CGCGAGCAAG CGGTTAACAA CGATATTGAA
GCCGAGCTTA ATGACAGTTT ATATGTGTTG GCGGGTGCTT CTGGGCGAAA TTTGGCCTTT
GGCCCAAGTT TAGTATTGTC CAGTGCGCCA GCGGGGCAAA AGGGCAATAC TGTGATTGCC
GGACACAGGG ACACGCATTT TGCGATCCTC AATGGTATGG CGGTGGGTCG CCGACTATCG
TTGCAGACGC TTAAGGGAAA TCATATTATT TATGAAGTGG TTGCGACTCA GGTGGTAAAT
GAAACTGAAA CGCAGTTTAT GGCGCCATCC GATGATAATC GCTTAACCTT AATCACTTGT
TATCCCTTCG ATGCGCTTCA AGGCGGCGCC GAACTGCGCT TTGTGGTGCA GGCGATACCG
GTTGAGGATG AATCAATGGA TACTGCTAGT GCCGATGTTT CAGCTTCAAC TGGAATGCAA
GGGAAGGTCG CTTCTGTATC GCGCAGTTTC ACCCATTAG
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| Protein sequence | MSKGRTQRFL VVGLFLIGAT LLGKGLYMQA KAHFAQYLIE QAWTKTLADG QSHKPWSWAD
TYPVAKLSIY REQAVNNDIE AELNDSLYVL AGASGRNLAF GPSLVLSSAP AGQKGNTVIA
GHRDTHFAIL NGMAVGRRLS LQTLKGNHII YEVVATQVVN ETETQFMAPS DDNRLTLITC
YPFDALQGGA ELRFVVQAIP VEDESMDTAS ADVSASTGMQ GKVASVSRSF TH
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