| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1828 |
|---|
| Symbol | |
|---|
| ID | 5372348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2193012 |
|---|
| End bp | 2193842 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640830031 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001366034 |
|---|
| Protein GI | 153000353 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.124445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AGACACTAAT TAATCTGTTG GTTTTGAGTT TATTAAGCGC GCCAGTCGCC
AGTGTGTCGG CGCGGGTTTC ACTGCAAAAC CAAGCTCAAG GACAGGAGCG CAGCTTAGAT
AATGACGTCG ATGCCAGCGG TATGGCGATG GATGGCGAAT ACGCCAATGA GGACGAACAG
CCAGAAGCCT TAATTGGCCT CGGTGGTGGT GCATTAGTTG GCGCGTTAGT CGGTGGCCCA
GTGGGGGCCA TTATTGGCGC GTTCACTGGC ACCTTGATTG GTAAGTCGGT TAGCGACACA
GACACGCTGC ACGTTCAGCA AAGACAGATC AGCCTGCAAG AGTCGCAATT ATCCGAGTTG
AGTGTAAAGC AACAAGCCGC CGAAAAACGC GCCAGCGAAT ATGCCAAGGC GCAGCAAGAG
CTTGATGAGT TGCTATCTGC GCAACGTCAA TTACTCAGTG AGCTCGCCCT AGGGCTAAAC
GTGCAGTTTC GCACTGGTTC CTCTGAGGTC GAATCGCATT TTTTGCCCCA ATTAGATGAT
GTGGCCGAGG TGATGAATCT GTCGCCTGAG CTTAATTTGG AATTGAAAGG CTATGCCGAT
CGTCGGGGTG ATGTGAGTTA CAACCAAGCC CTTTCTGAGC AACGTTTACT GGAAGTCCGT
GGCTACCTGA TTAAGCAGGG CGTCGCCGCT GAACGCATGA CAACACAAGC CTTTGGCGCT
TTATCGCCAC TGCAAGCGGA GCAGGACAGG GAATCGGATG TGTTCGATCG CCGTGTGACC
TTGACCTTAC AGCCTCATTC AACCTTGATG GCAACGCACA CGACGCAATA G
|
|---|
| Protein sequence | MMKKTLINLL VLSLLSAPVA SVSARVSLQN QAQGQERSLD NDVDASGMAM DGEYANEDEQ
PEALIGLGGG ALVGALVGGP VGAIIGAFTG TLIGKSVSDT DTLHVQQRQI SLQESQLSEL
SVKQQAAEKR ASEYAKAQQE LDELLSAQRQ LLSELALGLN VQFRTGSSEV ESHFLPQLDD
VAEVMNLSPE LNLELKGYAD RRGDVSYNQA LSEQRLLEVR GYLIKQGVAA ERMTTQAFGA
LSPLQAEQDR ESDVFDRRVT LTLQPHSTLM ATHTTQ
|
|---|
| |