| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1825 |
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| Symbol | |
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| ID | 5372424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2188440 |
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| End bp | 2189639 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830028 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001366031 |
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| Protein GI | 153000350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.255058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA AACATCATCA AGCCACCCAA ATCGTCAGCT TAGGTCGAGA CAAAAAATGG
ACCAAAGGCG TGATCAATCC GCCCGTTTTT CGTGCTTCGA CTATCGTCTT CGAAACGATG
GATGAAATGC GCCACGCCGC GAAAAATAAA ACCAACGGCG AGATGTTTTA TGGCCGCCGT
GGCACTCCAA CCCATTTTTC GTTTCAAGCG GCGATTGCCG AATTAGAAGG CGGCGTCGGT
ACAGCGCTGT ATCCCTCTGG CGCGGCGGCG ATCAGTGCGG CGTTATTGTC ATTTTTAAAA
ACCGGCGATC ACCTGTTGAT GGTCGATAGC GTGTATGAGC CAACGCGGGA TCTGTGTACC
CATATTCTCG GCGGTTTTGG TATCGAAACC ACTTATTACA ATCCGCTGAT TGGCGCGGGC
ATTCGCGACC TTATTCGCCC CAATACTAAA GTGTTGTTTT TAGAGTCTCC AGGCTCTATC
ACCATGGAAG TGCAAGATGT GCCGACCTTG TGCCGCATCG CCCACGAACA TGGGCTGATT
ACTATGCTGG ACAACACTTG GGCCTCGCCA ATCAATAGCA AGCCCTTTGA AATGGGGGTA
GATATTTCGA TTCAAGCGGC GACCAAATAC ATTGTCGGTC ACTCAGATGT GATGATAGGC
ACAGCTACCG CCAACGAAAA ATACTGGCCA CAATTGCGTG AACACAGCTA TTTGATGGGA
CAAACCACCT CCCCTGATGA TGTGTACCTT GCCGCCCGTG GCCTGCGCAC CTTAGGCGTG
CGTATGGCGC AGCATGAAAA AAATGCCCTG CAAGTTGCCA ACTGGTTGAA AACCCGACCA
GAAGTCGATC ATCTGCGTCA CCCGGCGTTT GATACCTGCC CCGGCCACGA GTTCTTTAAC
CGCGACTTTA GCGCCTCCAA CGGCTTGTTC TCCTTTGTAT TGAAACAAGG CGATGCCGAT
GCGGTCACCG CACTGGTTGA GAATATGAGT CACTTTAAGA TGGGCTTTTC TTGGGGCGGC
TACGAGAGTT TAATCCTCGG CATTTTCGGC ATTGAAAAAA TCCGCTCGGC GACAAAGTGG
GATGCGAGCA AACCGTTAAT TCGTTTGCAT ATTGGTTTAG AAGCTCCCGC GGATTTAATT
GCCGATCTCA GCGCAGGGTT TGAACGCTTT AACGCAGTAC TGGCGGCCAA AGCTAAGTAG
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| Protein sequence | MTDKHHQATQ IVSLGRDKKW TKGVINPPVF RASTIVFETM DEMRHAAKNK TNGEMFYGRR
GTPTHFSFQA AIAELEGGVG TALYPSGAAA ISAALLSFLK TGDHLLMVDS VYEPTRDLCT
HILGGFGIET TYYNPLIGAG IRDLIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLI
TMLDNTWASP INSKPFEMGV DISIQAATKY IVGHSDVMIG TATANEKYWP QLREHSYLMG
QTTSPDDVYL AARGLRTLGV RMAQHEKNAL QVANWLKTRP EVDHLRHPAF DTCPGHEFFN
RDFSASNGLF SFVLKQGDAD AVTALVENMS HFKMGFSWGG YESLILGIFG IEKIRSATKW
DASKPLIRLH IGLEAPADLI ADLSAGFERF NAVLAAKAK
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