Gene Shew185_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1824 
Symbol 
ID5372412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2187704 
End bp2188192 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID640830027 
ProductCreA family protein 
Protein accessionYP_001366030 
Protein GI153000349 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00367873 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC TGTTCAAGTG TGCGTTTGCC GCCACTGTGG GCTTTTTGCT TGCGGGTTGT 
GGTGACGATG TAGGTAAGGT GAGCTTAGGG CTTTTTACCA CTAAAGATGT GATTATCGAT
GCTAAGCACG ATCCTAAAAT TCCTGGGGTG ACTTGCCATA TTAGTCGTAT CGAAGCCAAT
TTAGATTTTG CCGATCCATC GGATATGGGC ATAAGTTGCC GTCAAACTGG GCCAATTAAC
GCGGCCGATC TGGCGAAGAT AGACATGGGT AAACATGGCG AAGTGATTTT TACCGAATCC
CTGAGTATTT TATTTAAGTC ATTAAAAGTG CGTAGAATTT ATGATGCGCA GAACCAGACT
CTGCTGTATT TGTCCTATTC GACTAAAGAG ACCAACGGCA GCCATAAACA TGCCCTTTCG
ACAGTGCCGC TTTATGGCTC AGCCGCTTGG GTTGACCCTG CGTTGAGTGC TGGAGCGAAA
GCGAATTAA
 
Protein sequence
MKTLFKCAFA ATVGFLLAGC GDDVGKVSLG LFTTKDVIID AKHDPKIPGV TCHISRIEAN 
LDFADPSDMG ISCRQTGPIN AADLAKIDMG KHGEVIFTES LSILFKSLKV RRIYDAQNQT
LLYLSYSTKE TNGSHKHALS TVPLYGSAAW VDPALSAGAK AN