Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1824 |
Symbol | |
ID | 5372412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2187704 |
End bp | 2188192 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830027 |
Product | CreA family protein |
Protein accession | YP_001366030 |
Protein GI | 153000349 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00367873 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTC TGTTCAAGTG TGCGTTTGCC GCCACTGTGG GCTTTTTGCT TGCGGGTTGT GGTGACGATG TAGGTAAGGT GAGCTTAGGG CTTTTTACCA CTAAAGATGT GATTATCGAT GCTAAGCACG ATCCTAAAAT TCCTGGGGTG ACTTGCCATA TTAGTCGTAT CGAAGCCAAT TTAGATTTTG CCGATCCATC GGATATGGGC ATAAGTTGCC GTCAAACTGG GCCAATTAAC GCGGCCGATC TGGCGAAGAT AGACATGGGT AAACATGGCG AAGTGATTTT TACCGAATCC CTGAGTATTT TATTTAAGTC ATTAAAAGTG CGTAGAATTT ATGATGCGCA GAACCAGACT CTGCTGTATT TGTCCTATTC GACTAAAGAG ACCAACGGCA GCCATAAACA TGCCCTTTCG ACAGTGCCGC TTTATGGCTC AGCCGCTTGG GTTGACCCTG CGTTGAGTGC TGGAGCGAAA GCGAATTAA
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Protein sequence | MKTLFKCAFA ATVGFLLAGC GDDVGKVSLG LFTTKDVIID AKHDPKIPGV TCHISRIEAN LDFADPSDMG ISCRQTGPIN AADLAKIDMG KHGEVIFTES LSILFKSLKV RRIYDAQNQT LLYLSYSTKE TNGSHKHALS TVPLYGSAAW VDPALSAGAK AN
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