| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1820 |
|---|
| Symbol | |
|---|
| ID | 5369887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2181650 |
|---|
| End bp | 2183212 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640830023 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_001366026 |
|---|
| Protein GI | 153000345 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.507724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTAGCCA CACATTCGCA CACACAGCAA CACACATTAC TAAAGTCGCA GGCACCACAA
ACCAATGCGC CCGCAAATGC TAAATCGCGC CACTTTGTTG CCATCGATAT GGGATCGAAC
AGTTTTCATC TGGTCATCGC CCGTGAGCAA GATGGCAGCT TGCAGATTTT ACACAAAGAA
AAACAACAGG TTCAGCTCGC CACTGGGCTT AATGCGCAGA ATATTCTCGA CAATGACGCC
ATAGAACGTG GCCTCAATTG TCTGCGGGAT TTTAACCAAA GATTTTCCAA TCTAGACCAA
GCGCAAGTGC GATTAGTGGC CACCCACACC CTCAGAATCG CCAAAAACCG CGATCAATTT
ATTGAGGCCG CGCTCGCCAT CATGCCCTAT CCGGTGGAAG TGATTTCGGG CCATGAAGAA
GCCCGTTTGA TTTACAACGG CATTGCCCAA AGCCAAGTGC TTGGAAAATC CAATTTAGTC
ATCGACATTG GTGGTGGCTC GACCGAAGTC GTGATCGGTA AAAAGAATAC CCCAACCCAG
TTATCTAGCC TGCGCTGCGG TTGCGTGAGT TTTAACGAGC GTTTCTTTAT CAATGGACTC
ATCACCCCAG CCTCATTTCG TGATGCCCAA AGCGCAGCCG ATAAGCAGTT CGCTTCACTC
TCCAAGGAAT ATTTCGCGGG CGGCTGGGAG CTGACGTTAG GCAGCTCAGG CACAGTCAAA
GCCATCTGCG AAGCGATTCA AGAAGAACAC GGTGATGAAA CCATCACGCT GCCACGACTC
AAACAGCTCA AAATCAAGTT GATCAAATGT GGTCATATTA GCCAAATTCA ATTTGCCAAT
GTCGATGATA AACGCATTCC TTTAGTGCCC GCCGGACTTG CTATTTTAAT CAGTTTTTTT
AGGCGCTTAC CGATACAAAA GCTCGAGTTT AGCCCAGGCG CACTGCGTGA AGGCGTACTC
TATGAACTGG CCAAAATTGG CCAGTATCAG GATATTCGCC ACCGCACCGT CGACAGTATT
GCCCAGCTTT ATCATATCGA TATGGCCCAC GCCGCTAAGG TACGCGACAC CGCCATGGCC
TTGTTTGAAC AGGTCGCCGA TGAATGGCAA TTAAGGCCCC ATGCACGCTT GCTCGCCTAT
GGCGCAACCT TACATGAGAT TGGGCTACAC ATTAATTCAA AGTCCCTGCA CAAACACGGT
GGCTATATCA TCAGCAACAG TGACTTACCC GGGTTTAGTG AAGCCTTACA GCTTGATTTA
GCGCGGCTTA TCACCAATCA CAGAAAAAAG CCCAACGAAT TAATGCTCGC CGAACTCGAT
CCCAACCATA AGCTCACGTT GAATCGCCTG CTCTGCCTGC TGAGGCTCGC TGTCTTGCTC
AATCTTGGCC GTATCGCCAA GACGCTGACC TTAGATCATA TTAAAGTGAT CCCCGATGGG
CTCATGCTAG TGCTACCGAG CCATAAGCGA AAAATCAGCC TGTTTATGAA GGATTTACAG
CGGGAACAGA AGCAAATGCT CACGCTTGGG ATGAACCTGC GGTTAGTGTC TAGTTTGACT
TAG
|
|---|
| Protein sequence | MVATHSHTQQ HTLLKSQAPQ TNAPANAKSR HFVAIDMGSN SFHLVIAREQ DGSLQILHKE
KQQVQLATGL NAQNILDNDA IERGLNCLRD FNQRFSNLDQ AQVRLVATHT LRIAKNRDQF
IEAALAIMPY PVEVISGHEE ARLIYNGIAQ SQVLGKSNLV IDIGGGSTEV VIGKKNTPTQ
LSSLRCGCVS FNERFFINGL ITPASFRDAQ SAADKQFASL SKEYFAGGWE LTLGSSGTVK
AICEAIQEEH GDETITLPRL KQLKIKLIKC GHISQIQFAN VDDKRIPLVP AGLAILISFF
RRLPIQKLEF SPGALREGVL YELAKIGQYQ DIRHRTVDSI AQLYHIDMAH AAKVRDTAMA
LFEQVADEWQ LRPHARLLAY GATLHEIGLH INSKSLHKHG GYIISNSDLP GFSEALQLDL
ARLITNHRKK PNELMLAELD PNHKLTLNRL LCLLRLAVLL NLGRIAKTLT LDHIKVIPDG
LMLVLPSHKR KISLFMKDLQ REQKQMLTLG MNLRLVSSLT
|
|---|
| |