| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1811 |
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| Symbol | |
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| ID | 5373655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2170878 |
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| End bp | 2173712 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830014 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001366017 |
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| Protein GI | 153000336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACA CTAAAACTGT GCTGGCGTTA GCCATCAGCA GCGTTTGTGG GCTTGCCCAT
GGCGCGGATA ATTTGATCAT TTCAGAATAC GTCGAAGGCA GCAGCAACAA TAAAGCCATC
GAATTGTATA ACCCAACTGC GGGCGTTATT GACTTAAGCC AATACCAATT GCGTTTCTAT
TTTAATGGCA GTACCAACGT CGGTACGGTC ATTGCGCTCA CTGGCTCATT AGCCGCGGGG
GCGACTTATG TAGTTGCCGA TAACGATGCG TCGGCCGATA TTCTTGCACT GACCAATCAA
CAAAGTACCG CCAGCTTCTT TAACGGCGAC GATGCGATTG AACTGACTTA CCAAAATCAA
GTGATTGATA GTTTAGGTCA AGTTGGTGTC GATCCCGGTG CCGAGTGGGG CAGTGGTGAT
TTATCCACTC AAGACAATAC CCTGCGTCGT AATCCTGAAA AGCTGATTGC CGATCCCATC
AGTGACGATG CGGTCAGCTT TAGCACTTGG TTAGGTTTTG CGAAGGATGA TATTTCTGAT
CTCGGTAAAT TCAGCGCCGG CACGCCGACC GATCCCGTCG ACCCGCCACC GAGTTCTTTA
GTGTGCGGTG AAGAAGCTAC AGCAATTCAT GCGCTTCAAG GCGCGGGTGC TGCCAGTCCT
CTTAATGGTC AAACCTTAGT GGTTGAAGCG GTTGTCGTCA GTAATCAAGA AGCCGGTCTT
AAGGGCATTT TTGTACAAAT GGCTGATAAC GAAGCCGATA GCGATCCCCA AACCTCGGAA
GGGGTGTTTG TGTATACCGG CACTGCACCT ACCGCGTATG TGGCGGGTGA TCGTATTCGT
TTAAAAGCCA AAGTCACTGA ATATCAAGGC TTAACTGAAC TAACGACTGT ATCAGATCAT
AAGTTGTGTG CCACTGCACA AGCATTACCA ACGGCGGCTG TGGTGACCTT ACCGGTTAAC
AGCAGTGATG ATTTTGAGCC ATTTGAGGGC ATGCGTGTTC GTTTCAGCCA AGATTTAGTG
GTGAACGAAG TCTACAACCT CGGTCGTTAC GGCGAGATTT CATTAGGCAG TCAGCGTCAC
TTTATTGGTA CGCAGGTGGC AGCACCGGGC GCGGATGCGC TGGCAGTGAG CGCAGCCAAC
CAACGTGACA GTATTTTATT GGATGACGGT TTAACGGCGC AGAATCCAGA TCCTGTGCAA
TTCCCCGCTC CTGGTTTGAG CGCATCAAAC ACTGTGCGTG TAGGCGATAA AGCCACATCG
CTTACGGGTG TAATGCACTA TGGCTTTAAT TTGTATCGCA TTATGCCAAT CGAGACGGTG
AACTTTGTGG CGGAAAACCC ACGTCCAATC GCACCCACAT TGGTTGAGGG CGGTAATCTA
AAAGTCGCTA GCTTTAACGT ACTTAACTAC TTCAATGGTG ATGGTCAAGG TGCAGGTTTC
CCAACTGCGC GTGGTGCCAA TACGTTGAGC GAATTTGAGC GTCAAAAGGC GAAGATTGTC
AGCGCCATGG TGGGCATTAG TGCCGACGTA TTTGGTTTGA TGGAAATCGA GAACGATGGC
TTTGGCGCTA ACTCAGCCAT TGCTGATTTA GTCGCAGGTT TGAATGCCGC TGTGGGTGAA
GTGCGTTACG CTTATATCGC GCCAACAGGC ATGAATGCGA TTGGCACCGA TGCCATCACA
GTTGGCTTGA TTTATCGTAG TGATAAAGTC ACGCCGCAGG GCGCTGCACG CATTCTATCC
AGTGCCAATT CGCCATTAGA TAGCGATCAA AAGCCCCTGT TTGACGACAG TAAAAACCGT
CCAATGCTGA CCCAAGCCTT TAGCGTGAAC GGCAGTGAAG AGGGCGTGGT TGTTGCGGTT
AATCACCTTA AATCTAAGGG CAGTGAATGT GCGGGCGATC CTGATCTCAA TGATGGTCAA
GGCAACTGTA ATATCACTCG TACCCGTGCG GCGACTGCCG CAGGTCAATG GATCAGCGAG
CAATATCCAG ATCAAGGCAT ACTGCTGATT GGTGATTTGA ACGCCTATGC GAAGGAAGAT
CCATTAACGG CGTTAGGTAA CGCGGGCTTT AGTGAGCTGT TTGCCAAACT TGAAAAGCCG
AACCCTTATT CCTATGTGTT CTCGGCAGAA TCGGGTCAGT TGGACCATGC TTTAGCAAAC
ACCGCCCTGC TGGATAAAGT GGTGGATGTG ACTGAATGGC ATATCAATAC CGACGAGCCG
CGCGTATTGG ATTACAACGA AGAGTTTAAG ACGCCTACTC AAATCCAAGA CTTATTCGCA
ACTGATGCGT ATCGCTCATC GGATCACGAT CCTGTGGTGA TTTCACTTTT ACTTGAAGCG
GAAAAAGTCG CGCCAGTGGC CAGTTTCACC CAAGTGGTGA ATGGTGCTGC AGTGCAACTG
ACATCCACTT CAACCGACAG CGATGGACAA ATCGTGTCTG CCGAGTGGAG CTTTGGTGAT
AATACAGTCG CAGTGGGTGA GGTAGTGACT CACAGTTACA GCCAAAGCGG CGAGTATCTG
GTCACGCTAA CTGTGACGGA TAACGACGGC TTAACCCATA GCACGTCACA AACTGTGTCT
GTGGTGGTTG GTGAGGTAAA ACAACCGCCT GTTGCGCAAA TTCAGCGTAT CAATTTATTG
TTCGTCGATA TGTTTATCTC GACTAGCTAC GATACCGATG GCGTAATCAA GCAACATAAA
TGGACGTTCG ACAATGGCAC CCGCGCTAAC GGTCAAGTGG TATTACGCCT TGCCCGCCGT
GGACAACACA CAGTTGAACT GACCGTTAAA GATAACGATA AGTTAACGGA TACTACGACG
CTGACGTATC GTTAA
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| Protein sequence | MFNTKTVLAL AISSVCGLAH GADNLIISEY VEGSSNNKAI ELYNPTAGVI DLSQYQLRFY
FNGSTNVGTV IALTGSLAAG ATYVVADNDA SADILALTNQ QSTASFFNGD DAIELTYQNQ
VIDSLGQVGV DPGAEWGSGD LSTQDNTLRR NPEKLIADPI SDDAVSFSTW LGFAKDDISD
LGKFSAGTPT DPVDPPPSSL VCGEEATAIH ALQGAGAASP LNGQTLVVEA VVVSNQEAGL
KGIFVQMADN EADSDPQTSE GVFVYTGTAP TAYVAGDRIR LKAKVTEYQG LTELTTVSDH
KLCATAQALP TAAVVTLPVN SSDDFEPFEG MRVRFSQDLV VNEVYNLGRY GEISLGSQRH
FIGTQVAAPG ADALAVSAAN QRDSILLDDG LTAQNPDPVQ FPAPGLSASN TVRVGDKATS
LTGVMHYGFN LYRIMPIETV NFVAENPRPI APTLVEGGNL KVASFNVLNY FNGDGQGAGF
PTARGANTLS EFERQKAKIV SAMVGISADV FGLMEIENDG FGANSAIADL VAGLNAAVGE
VRYAYIAPTG MNAIGTDAIT VGLIYRSDKV TPQGAARILS SANSPLDSDQ KPLFDDSKNR
PMLTQAFSVN GSEEGVVVAV NHLKSKGSEC AGDPDLNDGQ GNCNITRTRA ATAAGQWISE
QYPDQGILLI GDLNAYAKED PLTALGNAGF SELFAKLEKP NPYSYVFSAE SGQLDHALAN
TALLDKVVDV TEWHINTDEP RVLDYNEEFK TPTQIQDLFA TDAYRSSDHD PVVISLLLEA
EKVAPVASFT QVVNGAAVQL TSTSTDSDGQ IVSAEWSFGD NTVAVGEVVT HSYSQSGEYL
VTLTVTDNDG LTHSTSQTVS VVVGEVKQPP VAQIQRINLL FVDMFISTSY DTDGVIKQHK
WTFDNGTRAN GQVVLRLARR GQHTVELTVK DNDKLTDTTT LTYR
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