Gene Shew185_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1798 
Symbol 
ID5370108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2160321 
End bp2161193 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content44% 
IMG OID640830001 
Producthypothetical protein 
Protein accessionYP_001366004 
Protein GI153000323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.145429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GCGTGATGCT ACTTGTGTGT CTCTTAGGCT TAAGCGCCTG TTCCACTAAA 
TTCAGTTACC ATTTTCTCGA TTGGGCTATC GGTTGGGAGC AAGAGGACTA CGTTACCTTA
GATAAACCAC AGCAAAAGGC ATTTGACGCC CTCATTGAAA AATTTGTCCT GTGGCATCAA
TCTAAAGAAT TGTCCCACTA TGTGGTGCAA TTAACCGAAG TCGAAAGCCT CATCAAAACC
AATACCTTAA CACCAGTATT ATGGGCCGAG CATGTGGAGA TTGCTAAGCG GCATTGGTTT
CGTTTGTTTG AGTTTGCCTT GCCAGAATTA CTGCCCATCA TCATGTCCTT GTCAGATGAA
CAGGTGAAGC AAATCCTCGC CAAATTACGG CAAGATGAGC AGGAGCTCGT CAAAGAGTTT
GCCGGCAAAA CTCCAACGCA GTTACAAAAA GAGGCCGACG AAAACCTTCA AGAGCAATTT
GATGACTGGC TTGGCAGTGT GAGTGCAGAA CAAAAAGTGC TTATTCATCA GTATAATCAA
CAGCGTTTAT CCACCTTAGA TATGTGGCTC GAATACCGCC ACGAATGGTT ACGTCAGTTT
GAAGTTGCTC TTGGGCAGCG GGCAGATAAA GCGCTATTAA CCGAGCGTTT GACCCTGTTG
ATGACGCAGC CCGATGAGCT TAAGTCTGAG CAACATAAAG TGTTTTTGCG TAAAAATACT
GAGGCATTTG GGACCTTACT GCTGGCGATG AACACGAGTT TGTCGGAGAA GCAGTCGAAA
CATTTTTATA AAAAGTTGGG TGGACTCATT CAAGATCTCA CCGAGCTTAA TCAAGAAGCC
ATTGAAAAAG AGGCGAGTAC AAAAAAAGCC TAG
 
Protein sequence
MKKGVMLLVC LLGLSACSTK FSYHFLDWAI GWEQEDYVTL DKPQQKAFDA LIEKFVLWHQ 
SKELSHYVVQ LTEVESLIKT NTLTPVLWAE HVEIAKRHWF RLFEFALPEL LPIIMSLSDE
QVKQILAKLR QDEQELVKEF AGKTPTQLQK EADENLQEQF DDWLGSVSAE QKVLIHQYNQ
QRLSTLDMWL EYRHEWLRQF EVALGQRADK ALLTERLTLL MTQPDELKSE QHKVFLRKNT
EAFGTLLLAM NTSLSEKQSK HFYKKLGGLI QDLTELNQEA IEKEASTKKA