Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1798 |
Symbol | |
ID | 5370108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2160321 |
End bp | 2161193 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640830001 |
Product | hypothetical protein |
Protein accession | YP_001366004 |
Protein GI | 153000323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.145429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GCGTGATGCT ACTTGTGTGT CTCTTAGGCT TAAGCGCCTG TTCCACTAAA TTCAGTTACC ATTTTCTCGA TTGGGCTATC GGTTGGGAGC AAGAGGACTA CGTTACCTTA GATAAACCAC AGCAAAAGGC ATTTGACGCC CTCATTGAAA AATTTGTCCT GTGGCATCAA TCTAAAGAAT TGTCCCACTA TGTGGTGCAA TTAACCGAAG TCGAAAGCCT CATCAAAACC AATACCTTAA CACCAGTATT ATGGGCCGAG CATGTGGAGA TTGCTAAGCG GCATTGGTTT CGTTTGTTTG AGTTTGCCTT GCCAGAATTA CTGCCCATCA TCATGTCCTT GTCAGATGAA CAGGTGAAGC AAATCCTCGC CAAATTACGG CAAGATGAGC AGGAGCTCGT CAAAGAGTTT GCCGGCAAAA CTCCAACGCA GTTACAAAAA GAGGCCGACG AAAACCTTCA AGAGCAATTT GATGACTGGC TTGGCAGTGT GAGTGCAGAA CAAAAAGTGC TTATTCATCA GTATAATCAA CAGCGTTTAT CCACCTTAGA TATGTGGCTC GAATACCGCC ACGAATGGTT ACGTCAGTTT GAAGTTGCTC TTGGGCAGCG GGCAGATAAA GCGCTATTAA CCGAGCGTTT GACCCTGTTG ATGACGCAGC CCGATGAGCT TAAGTCTGAG CAACATAAAG TGTTTTTGCG TAAAAATACT GAGGCATTTG GGACCTTACT GCTGGCGATG AACACGAGTT TGTCGGAGAA GCAGTCGAAA CATTTTTATA AAAAGTTGGG TGGACTCATT CAAGATCTCA CCGAGCTTAA TCAAGAAGCC ATTGAAAAAG AGGCGAGTAC AAAAAAAGCC TAG
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Protein sequence | MKKGVMLLVC LLGLSACSTK FSYHFLDWAI GWEQEDYVTL DKPQQKAFDA LIEKFVLWHQ SKELSHYVVQ LTEVESLIKT NTLTPVLWAE HVEIAKRHWF RLFEFALPEL LPIIMSLSDE QVKQILAKLR QDEQELVKEF AGKTPTQLQK EADENLQEQF DDWLGSVSAE QKVLIHQYNQ QRLSTLDMWL EYRHEWLRQF EVALGQRADK ALLTERLTLL MTQPDELKSE QHKVFLRKNT EAFGTLLLAM NTSLSEKQSK HFYKKLGGLI QDLTELNQEA IEKEASTKKA
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