| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1794 |
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| Symbol | |
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| ID | 5373571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2155719 |
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| End bp | 2157953 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829997 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001366000 |
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| Protein GI | 153000319 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000583553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAACA GTAAAACGCT AAACAGTAAC ACGTCAAAAC GCCATTCCCC GTTTTCAACC
ATCACACCCA GCTTGTTTTT AACCCGAGCG CCGCTGGCGT TAGCCATTGC TACCGCGCTG
AGCACTTCTG CATTTGCACA AACCGATGCT ATCGATAAAC CCGATCCCAG CACTGAGATG
GAAGTCATGG TGGTGACGGC GGATTTTCGC AGCTCAAGCT TAGAAAAAAT GCCTTCCAGC
ATTACCGTTA TCGACAGCCA AAAAATTCAA GATGAAAGCG CGCAGCACTT TGAAGATCTG
CTTAATTCAA TCGCCAACTT TAACTGGTCA GGTGGAAGTT CGCGGCCAAA ATATTTTCAA
ATTCGCGGTG TAGGTGAGCA AGAGCAATAC CAAGGCGCGC CTAATTCTTC TGTGGGTTAC
ATCATAGATG ATATCGATTT ATCCGGTATT GGCATGGTGT CGAGCATGTA CGATCTACAG
CAAGTCGAAG TGCTACGTGG ACCACAGGGC ACACGTTATG GCGCGAATGC CTTAGCGGGA
CTGATTTATC TGAAAAGTAA CGATCCCACC GATGTGTTTG AACATGGCGG CGAAGTATCG
TTAGGCGATG ATGATTTACG CACGTTTAGC GGTTTCAGTT CCGGCCCATT AACGGATTCT
GGCAAGCTGC TTTATCGCGT GTCACTGCAG CAACATCAAC AAAATGGTTA CCACGACAAC
CTCTATTTAG GTCGTGACGA TACCAATGGC CGCGATGAGT TCAGCGGCCG CGCTAAGCTG
CGCTGGTATG CGACTGACGA TTTGCAGTTT GATTTAACTG TGCTGCACGC CGATTTTGAT
AATGGCTATG ATGTGTGGAG TTTAACCAAT TCACCGACCC AGACGACATC GGATCAACCG
GGTGTCGATA GCCAGCGCAC CACAGGCGCA GGCTTTAAAG CGACCTATTC TGGCGCTGAA
ACCTTTGAGC TAACCTCGTT AACGTCCTTT GCGAATACCG ATCACCATTA CAGTTACGAT
GGCGATTGGT CGAACCCAGA GTATTGGGCT TCTAAGCAAT GCAGTGATGA CGATGGCAAT
CTGGCACCGT GCCAATATGA TTATTTTTGG GATAAAACGG GCCAACGTAA AACCGTGTCG
CAAGAGTTTC GCTTAAGTTC TACCGAGCTG GGCCGAATCT TTGCGGACAG TACGGATTGG
TTGCTTGGTG TGTACGGCAT GAATCTGAAA GAAGATAACC AATTGTATTC TGAGTACAAT
GCTTGGCCGG ATGAAGTCTT AGACTCTGAG TATGAAGCGA CGAACTATGC CTTGTTTGGT
CAGCTCGATA CGGATCTGGG CTCAGATTAT GCCTTATCTG TGGGCCTACG TTTAGAGCGC
CGTAACAGCC ATTACTCAGA TACGAATAAC GATAATTTCG ACCCGAGTGA AACCATGTGG
GGCGGGCATA TTGCTGTGAG TAAAGTGCTG AATGACTCGC ACAACGCATA TGTCCGTGTC
GCGCGCGGTT ACAAGGCGGG CGGTTTCAAC ATGACTTTAC CTGTCGAATT GAACGATAAA
AAAGAGTTTA GTACTGAGAC GCTTTATAAC TATGAAATTG GCCTTAAATC CCATTGGTTA
GCTGGGCTTA TCGATACTAA TCTGGCGCTG TTCTATATGG ACAGACAAGA TCAACAGGTG
GCGGCATCTC AGCAAGACCC TGATAAACCG CAGCGTTTTA TCTTGTTCAC CGAAAACGCT
GGTAGTTCTA ATAACTATGG TGCTGAGTTA GATGCGACCT GGTATGCCAC GGATAATCTA
CAAATTTACT CAAGCTTAGG TTGGTTAGAA ACGGCCTACG GTGACTACCA GTATCAGGAT
AAATACGGCA CTGAGGTCGA TTTAACTGGC CGCGATCTGG CTCATTCACC ACACTTTACC
TACAGCCTTG GTGGGACTTA TCGTACCAAT TCGGGCTGGT TTACTAACCT AAACCTGAGC
GGTAAGAGTG AGTTTTACTA TTCCGACAGC AATGAATCCC GTTCTGAGCC CTACACTATC
GTCAATGCCC GCGTGGGTTA TGAGGCGAGT GCATGGTCAG CCTATTTATG GGGCCGTAAT
TTGTTCAATG AAGAATACGG TGTGCGCGGC TTCTACTTCG GTAACGAGCC TGATAATGGC
TGGGCTGAAA AGCAATATAT TCGTTACGGC GATCCGCGTC AGATTGGCGT AACCTTTAAC
GTTAAGTTTA TGTAA
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| Protein sequence | MLNSKTLNSN TSKRHSPFST ITPSLFLTRA PLALAIATAL STSAFAQTDA IDKPDPSTEM
EVMVVTADFR SSSLEKMPSS ITVIDSQKIQ DESAQHFEDL LNSIANFNWS GGSSRPKYFQ
IRGVGEQEQY QGAPNSSVGY IIDDIDLSGI GMVSSMYDLQ QVEVLRGPQG TRYGANALAG
LIYLKSNDPT DVFEHGGEVS LGDDDLRTFS GFSSGPLTDS GKLLYRVSLQ QHQQNGYHDN
LYLGRDDTNG RDEFSGRAKL RWYATDDLQF DLTVLHADFD NGYDVWSLTN SPTQTTSDQP
GVDSQRTTGA GFKATYSGAE TFELTSLTSF ANTDHHYSYD GDWSNPEYWA SKQCSDDDGN
LAPCQYDYFW DKTGQRKTVS QEFRLSSTEL GRIFADSTDW LLGVYGMNLK EDNQLYSEYN
AWPDEVLDSE YEATNYALFG QLDTDLGSDY ALSVGLRLER RNSHYSDTNN DNFDPSETMW
GGHIAVSKVL NDSHNAYVRV ARGYKAGGFN MTLPVELNDK KEFSTETLYN YEIGLKSHWL
AGLIDTNLAL FYMDRQDQQV AASQQDPDKP QRFILFTENA GSSNNYGAEL DATWYATDNL
QIYSSLGWLE TAYGDYQYQD KYGTEVDLTG RDLAHSPHFT YSLGGTYRTN SGWFTNLNLS
GKSEFYYSDS NESRSEPYTI VNARVGYEAS AWSAYLWGRN LFNEEYGVRG FYFGNEPDNG
WAEKQYIRYG DPRQIGVTFN VKFM
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