Gene Shew185_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1790 
Symbol 
ID5372018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2153545 
End bp2153901 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content49% 
IMG OID640829993 
Producthistidine triad (HIT) protein 
Protein accessionYP_001365996 
Protein GI153000315 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.305934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAG AAACGATTTT CAGCAAAATT ATTCGTCGCG AAATTCCCGC GGATATTCTG 
TATCAAGATG AACTTGTGAC TGCCTTTAGA GACATTTCCC CTAAGGCGCC AACCCATATT
TTGATTGTGC CGAATCATTT GATCCCAACG GCGAACGACA TGAAAGCCTC TGATGAGCCA
GTGCTTGGCC GTATGATGAC TGTTGCCGCT AAATTGGCGG CGGAAGCGGG TATCGCTAAA
GATGGCTACC GACTGATAAT GAACTGCAAT CAACACGGTG GACAAGAAGT CTATCACATT
CATTTCCACC TTGTGGGCGG GGAGCCTCTG GGGCCCATGT TGAGTCAAGG CCAATGA
 
Protein sequence
MAEETIFSKI IRREIPADIL YQDELVTAFR DISPKAPTHI LIVPNHLIPT ANDMKASDEP 
VLGRMMTVAA KLAAEAGIAK DGYRLIMNCN QHGGQEVYHI HFHLVGGEPL GPMLSQGQ