| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1789 |
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| Symbol | |
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| ID | 5369422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2151634 |
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| End bp | 2153400 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829992 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001365995 |
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| Protein GI | 153000314 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.119703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCATT ACCAGATAAT CCCCGTCGAT CCGAAAGCCC ATTTATTCGC AGTCACTATG
ACATTATCCC AGCCCAAGCC TGTGCAGGTC TTTAGCCTAC CCGCTTGGCT GCCTGGCAGT
TACATGGTGC GTGACTTTGC CAAAAAAATC ATTGAACTCA AGGCACAAGA TGCTAATGGC
CAAACGCTCA AGCTCATACA GCTAGATAAG CAAACTTGGT CGGTTGACAA TAATAGCAGC
GAAATCATTT TGACTTATCA AGTGTATGCT TGGGATCTGT CGGTGCGCAC TGCGCATTTG
GACACAACCC ACGGCTTCTT TAACGGCAGT AGCGTGTTTT TATCCGCCCA CGGTTTTGAA
CAACAAACCC ACACTGTCAC TATGTTAGCG CCCTCTGAGC CCACATTAGG TAACTGGCGC
GTTGCTACGA GCATGACCCG CATCAGTGGT GACGACTTTG CCTTCGGCCA ATTTAGTGCC
ACAAGCTATG ACGAGCTTAT CGATCATCCA GTGGAAATGG GCTTATTTAC CTTAGCCAGT
TTCGATGCCT GCGGCGTCCA ACACGATATC GTCCTCAATG GCCGCCACCG CGCTTGCATG
CCAAGGCTCT GCCAAGACTT AAAAGCCATT TGTGAGTATC AAATCAATCT TTTTGGTACG
CCTGCGCCGT TTAAACGTTA TTTGTTTATG ACCACAGTAT TAGACAATGG CTTTGGCGGG
TTAGAGCACA GAGCTTCTAC CGCATTAATG TGTTCACGCA AGGATTTGCC GTTGTCGCTC
GATGCGCCAA TTAATAACGA CTATCGCACT TATTTATCCC TATGTAGCCA CGAGTATTTC
CACAGCTGGA ACGTGAAGCG GATTAAACCT GAATGCTTTT TACCCTACAA ACTTGATGCT
GAAACCTACA CACCGCAACT GTGGGCCTAT GAGGGCATCA CCTCCTATTA CGATGACTTC
CTCACCTATC GCGCCGGACT GGTTGATGAA CAAAGCTATT TAGATATGCT GAGTGAGACC
TTTACCCGTG TCTATCGCAG CCAAGGGCGC TTTAAACAAA GTGTTAAAGA TTCAAGCTTT
AATGCGTGGA CTAAGTTCTA TAAGCAGGAT GAAAACGCGC AAAACGCCAT CATCAGTTAT
TACACCAAAG GCGCGCTGTT TGCGCTGTAC TTAGATTTAA CCCTGCGCAG TGAAACCCAA
GGCAAATACA ATCTCGACCA TGTTATGCAG ATTTTATGGC AGGAATATGC TCTGCAAGAT
AAAGGCACGA CTGACGGCTG TCACCAAGCG ATTGTCGAGC GACTCCTTGA CCGTGATTGC
CACGATTTGT TTGCCTACTT AGATAACACC GATGATATTC CACTGGCTGC GCTACTCGCC
GAATTTGGCG TCGAGTTTAA CCTTCGAGCC AGCCAAGGTC CGCAGGATGT GGGCGGCGGG
CAAGCTAAAG GTTATGACAT TGCCTTTGGC GCGAAAACTC AAGCGGCGCC GATGGGATTG
AAAGTGGTGA CAGTTACCCA AGGCAGCCCT GCCCACCTTG CGGGGTTAAG TGCGGGGGAT
ATCTTAATCG CCGCCGATAA CTTGCAAGTC AGCGCGCAAT TTGAGTCGCA GCTGCAGCAA
TATCCGCTGG GTGAATCCTT GAATCTACAT TGGTTTAGAC GGGATGAATT GATGACGGGT
GAATTGATGA TAACTGCCGC GCCGAAGGAC ACTGTCGCCC TAGCAATTAG TGACAAGACT
AAGCTCGCGG CTTGGTTAGG ACGTTAA
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| Protein sequence | MIHYQIIPVD PKAHLFAVTM TLSQPKPVQV FSLPAWLPGS YMVRDFAKKI IELKAQDANG
QTLKLIQLDK QTWSVDNNSS EIILTYQVYA WDLSVRTAHL DTTHGFFNGS SVFLSAHGFE
QQTHTVTMLA PSEPTLGNWR VATSMTRISG DDFAFGQFSA TSYDELIDHP VEMGLFTLAS
FDACGVQHDI VLNGRHRACM PRLCQDLKAI CEYQINLFGT PAPFKRYLFM TTVLDNGFGG
LEHRASTALM CSRKDLPLSL DAPINNDYRT YLSLCSHEYF HSWNVKRIKP ECFLPYKLDA
ETYTPQLWAY EGITSYYDDF LTYRAGLVDE QSYLDMLSET FTRVYRSQGR FKQSVKDSSF
NAWTKFYKQD ENAQNAIISY YTKGALFALY LDLTLRSETQ GKYNLDHVMQ ILWQEYALQD
KGTTDGCHQA IVERLLDRDC HDLFAYLDNT DDIPLAALLA EFGVEFNLRA SQGPQDVGGG
QAKGYDIAFG AKTQAAPMGL KVVTVTQGSP AHLAGLSAGD ILIAADNLQV SAQFESQLQQ
YPLGESLNLH WFRRDELMTG ELMITAAPKD TVALAISDKT KLAAWLGR
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