Gene Shew185_1788 details

Gene Information

• Locus tag: Shew185_1788
• ID: 5369421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 2150829
• End bp: 2151464
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640829991
• Product: response regulator receiver protein
• Protein accession: YP_001365994
• Protein GI: 153000313
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAAAA TATTACATTG GATTGTAGTG TCACGATCGC AAGTATTAAT GGAACTGCTA 
GCAGGACGTT GGCCACAGGA GTTTCTCGTT AAGTTGACGC AAGTCAGCCC AGATGAGATG 
TGTGAACAAA TCAAGGATAA TCATGCCTCC ATGGTAGTGA TTGATTTAGC GACTGTTGAT 
CTTCAAAAAG CCCATCAATT TCAGCGTTTA CTTGCCCGTG AACAACCAAG TGTACGAGTC 
GTCTATTTAC AATTCCCTAA ACAAGTGGAT GCGCGCTTTT TAATGCAAGC TGCCACGACC 
GCAGGGGTGT TTTATCTCGA TGCGGGTTTA ACTGAGATTA GCCTAGGATT CTCGAATATT 
TTACGAGGCC ATAGGGTGAT CCCAATTCAA CTCGTCAATG GGGTGAACGA TGACTTTGGT 
TTGTTCGAAG ATACTGAACC GCTGACGATT CGTGAGCGAG AAGTATTACA AGCCCTCTTA 
ACGGGTAGCA CTAACTTAGA TATTGCCAAT CAGTTGTTTG TCAGTGAAAG CACGATAAAA 
ACCCATTTGT ACCGAGTATT CCGTAAGATA GGTGTGTCGA GCCGTGGTCA AGCGATCGCG 
TGGGCGCAAA CCTATTTGCA CGATGTGGTG GTTTAA 

 

Protein sequence

MFKILHWIVV SRSQVLMELL AGRWPQEFLV KLTQVSPDEM CEQIKDNHAS MVVIDLATVD 
LQKAHQFQRL LAREQPSVRV VYLQFPKQVD ARFLMQAATT AGVFYLDAGL TEISLGFSNI 
LRGHRVIPIQ LVNGVNDDFG LFEDTEPLTI REREVLQALL TGSTNLDIAN QLFVSESTIK 
THLYRVFRKI GVSSRGQAIA WAQTYLHDVV V