| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1787 |
|---|
| Symbol | |
|---|
| ID | 5369420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2149785 |
|---|
| End bp | 2150531 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640829990 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_001365993 |
|---|
| Protein GI | 153000312 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3658] Cytochrome b |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCA GTAAACCCAC CGCGCTTGAA GTCAAATCCT ACCCTGTGTG GGACAAACCG
ACTCGATTAT TCCATTGGAT AAATGTCATT CTCGTGCTCG CACTCATCTT AGTGGGTGGC
ATCATGATGT ATCGCACTGA GTTAGGCATC ACTGAGTTAA CCGGCAAAAT TGGCTTAAAA
ACTTTACACG TGTGGATAGG ATATGCGTTT GCAATCAACC TTATCATTCG CCTTGTGTGG
GGTTTTGTCG GTAACAAATA TGCGCGTTTC AGCCATATGT TTCCCAATGC CAATAGCAAA
AATGAGTTAA TGACCTACAA GTCCGAATTG GCCGCGGGTA AAAATCCGCA GTATTTAGGC
CATAATCCTA AAGGTAAATT TGCTGTCCTC GGCATTATGC TGCTGTTAGT TACTATCATG
GTAACTGGGC TTTTACGCGC AGGAACAGAT ATTTACTACC CACCGTTAGG TAGTGCTGTA
CAAAGCTATC TGGCCGATAC CAATGTCGAT CCAGCAAGCT TAAAACCCTA TGATGCCACT
GGGGTGAATA CCGAGAAAGC GGATGCGCTT AAACCGCTGA AGGGACTTGC CGGTGAAGTT
CACGTTTATG CGGTATATCT ACTTTTGCTA CTGATTTTAC TGCATGTATT CGCAGTGGTT
TATACCGAAG TTAAACGTCA ACCTGGGATT ATTTCAGCCA TGTTCTCTGG CAAGAAGATC
ATCCAAGGTC AGCCAAAAGA CGAGTAA
|
|---|
| Protein sequence | MSSSKPTALE VKSYPVWDKP TRLFHWINVI LVLALILVGG IMMYRTELGI TELTGKIGLK
TLHVWIGYAF AINLIIRLVW GFVGNKYARF SHMFPNANSK NELMTYKSEL AAGKNPQYLG
HNPKGKFAVL GIMLLLVTIM VTGLLRAGTD IYYPPLGSAV QSYLADTNVD PASLKPYDAT
GVNTEKADAL KPLKGLAGEV HVYAVYLLLL LILLHVFAVV YTEVKRQPGI ISAMFSGKKI
IQGQPKDE
|
|---|
| |