Gene Shew185_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1783 
Symbol 
ID5370890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2145617 
End bp2147086 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content47% 
IMG OID640829986 
Productpeptidase M48 Ste24p 
Protein accessionYP_001365989 
Protein GI153000308 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.510736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTAATT TGACTTTTTT AACTCGATTA AAACCTTTTG TTGCAGGCGC ACTCTCTTTG 
ATGCTGCTAA CCTTCGCCGC CAAAAGCTTT GCTAACAATG ACTTACCGGA TTTAGGTACG
GCCGCAGTTA ACACCTTCAG CCTTGAAAAA GAAATGGTTT ACGGTGATGC CTATATGCGC
ATCATTCGCT CCTCGGCGCC TATGTTAAAT GATCCCGTGT TGAGTCAATA TCTTACTGAG
CTTGGCAACA AACTGGTCGC CCATGCCACA GGGGTAAAAA CGCCCTTCTA TTTCTTCCTG
TTACAAAATG ATGAAATCAA CGCCTTCGCC TTCTTCGGCG GCCATGTTGC CGTACACACA
GGCTTATTTC TCAATGCCGA TAACGAAAGC GAACTCGCCT CAGTACTCGG TCACGAAATT
ACCCACGTTA CCCAACGTCA CCTTGCGCGT TCGCTCGAAG CACAGCAAAA GAGCAATCCT
GCGACGATTG CCGGTTTACT CGGCGCCATT TTACTAACCA TCGCCGTGCC ACAAGCCGGT
ATGGCTGCGC TGGCGACTAC CCAAGCGATG GCAACGCAAT CAAAAATCAA CTATACCCGT
TTACATGAGA AAGAAGCCGA CCGCATCGGT ATGCAAATTT TGGTGGATGC AGGCTTTGAC
CCCAACGCCG CCGCGGATTT CTTTGGTAAG TTAGCCACTC GTTATCGCTT TACCACCACA
CCGCCACAAA TGCTGTTAAC TCACCCATTA CCTGAGTCGC GGATCACCGA AGCCCGTAAC
CGCGCCGAGC AGTATCCTAA GCGTTATATT CCCGACAACC TGAATTTCCA GCTGGCGAAA
GCCCGTATTC AAGTCCGTTT TTCAAGTTAT AGCGACGAAG CGGTTTTAAG TATGTTTGAC
AGACAACTGA ACAAACAGAC CTACAGCTTT AAAGAGGCAG CGCTCTATGG CAAAGCGCTG
GCGTTATTTA GATTGAAGAA GTTTGATGAG TCGGAAAAAA TCGTCGATGA ACTGTTGAAA
ATTGATGATA ACAATCTGTT TTATATCGAT ACTAAAGCCG ATTTACTGAC CGAACGTAAA
GACTACGCGA AAGCGATTGC GATGCTTGAA GCCCAGCGGA AAATGAAGCC AACATCGCAA
GTGATTAACG CCAACTTAGC CAATATCTAC CTAGAAGCAG ACCAAGCCCC TAAGGCAATC
CCTTTGTTGG AGGATATGAT ATTTCTCGAT AAGCAAAATC AGCTGCCCTA TCAATTGCTG
AGCGCTGTCT ATAAAAAAAC AGGTAATCAG GCATTGGAAT ATTTTTCCAC CGCTGAGCTC
ATGGCATTAG GGGCTAACTA TAAGGGCGCT ATCGATCAGC TTAACTTTGC CTACCGTGCA
TCCGAAAGTA ATCCCTTACA GCTTGCACGT ATTGAAGCCC GTATTCGCCA ATTCAAAATG
GCCGATAAAG AGATGGAAGC ACTTAAGTAA
 
Protein sequence
MRNLTFLTRL KPFVAGALSL MLLTFAAKSF ANNDLPDLGT AAVNTFSLEK EMVYGDAYMR 
IIRSSAPMLN DPVLSQYLTE LGNKLVAHAT GVKTPFYFFL LQNDEINAFA FFGGHVAVHT
GLFLNADNES ELASVLGHEI THVTQRHLAR SLEAQQKSNP ATIAGLLGAI LLTIAVPQAG
MAALATTQAM ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAADFFGK LATRYRFTTT
PPQMLLTHPL PESRITEARN RAEQYPKRYI PDNLNFQLAK ARIQVRFSSY SDEAVLSMFD
RQLNKQTYSF KEAALYGKAL ALFRLKKFDE SEKIVDELLK IDDNNLFYID TKADLLTERK
DYAKAIAMLE AQRKMKPTSQ VINANLANIY LEADQAPKAI PLLEDMIFLD KQNQLPYQLL
SAVYKKTGNQ ALEYFSTAEL MALGANYKGA IDQLNFAYRA SESNPLQLAR IEARIRQFKM
ADKEMEALK