| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1779 |
|---|
| Symbol | |
|---|
| ID | 5371611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2141499 |
|---|
| End bp | 2142209 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640829982 |
|---|
| Product | DNA replication initiation factor |
|---|
| Protein accession | YP_001365985 |
|---|
| Protein GI | 153000304 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000277265 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTTAA ACTCACCTCT GCAACTCTCG TTACCTGTGC ATTTGCCAGA CGACGAAACC
TTTAACAGTT ATTACCCTGC CGCGGGTAAT GATGAGCTTA TTCAAAAACT GAGAGCCAAT
GCCGAAGGGC AGGGTGAAGC CGCCATCTAT TTGTGGGGCC CTGTCAAATC GGGTCGAACC
CATTTAATGC ACGCCGCTTG CGCCCACGCC AATGAAGTTG AGCGTCGCAG CTTTTATATT
CCATTAGGCA TACATGCGAG TATCTCGACC GCCTTGCTTG AAGGACTAGA ACAGTTAGAT
TTAGTTTGTA TCGATGATGT CGATGCCATC GCTGGTCACC CCGTCTGGGA AGAAGCGATT
TTTGATCTCT ATAACCGCGT CGCTGAACAT AAAAATTGTG CTTTAGTGGT CAGTGGCAGT
TCGTCACCTG CGGATGCTGG GTTCCTCTTG CCAGATCTCG TTTCACGTAT GCAGTGGGGT
TTGAATTATC AACTGCAACC TATGGCTGAT GATGAGAAAC TTGCCGCACT GCAACGCCGC
GCCGCCATGC GTGGCCTGCA ATTACCGGAA GACGTGGGAC GTTTTTTGCT GAATCGAATG
GCGCGGGATT TACGTACCTT GTTCGATGTA TTGGATAAGT TAGATAAAGC CTCATTAGTG
CACCAGCGCA AGCTCACCAT TCCCTTTGCC AAAGAGATGC TGCATCTTTA A
|
|---|
| Protein sequence | MPLNSPLQLS LPVHLPDDET FNSYYPAAGN DELIQKLRAN AEGQGEAAIY LWGPVKSGRT
HLMHAACAHA NEVERRSFYI PLGIHASIST ALLEGLEQLD LVCIDDVDAI AGHPVWEEAI
FDLYNRVAEH KNCALVVSGS SSPADAGFLL PDLVSRMQWG LNYQLQPMAD DEKLAALQRR
AAMRGLQLPE DVGRFLLNRM ARDLRTLFDV LDKLDKASLV HQRKLTIPFA KEMLHL
|
|---|
| |