Gene Shew185_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1778 
Symbol 
ID5371610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2140340 
End bp2141431 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID640829981 
Producthypothetical protein 
Protein accessionYP_001365984 
Protein GI153000303 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000002473 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAT TCCTATTGAA GCCGAGCTTA ATTGCATTTC TATATTGTCT GTTCACGATT 
AATAGCGTCA ATGCTGTTGA GGTGAGTAAA TTAGATGAGG CCAATGTGCC TGTGTCTTCG
CGCGCGGTTG CAGAACGCGA CAAAGCCCTA AAAAGTGCAC TTGAGCAAGT CATTATCAAG
AACACTGGCA CGGCGCGATC CCTCGACAAC AGTCTGATCC AATCTCAGCT CAGTAATCCT
GATACCTTGC TGAGCCAGTA TGGTTATATC GAGCAGAATG GCCAATTACT GTTAACTGCC
AGTTTTGAAC ACCGTCGCAT CGTGGCGCTA CTGCGTCAGG CGCAATTGCC CGTTTGGGGA
ACACAACGCC CGCTGACCTT ATTTTGGGTC GCAATGCCAG GCGATGGCGA CACTATGATA
TTGGGTGACT CGTCTGCGTT AGCCGAACGT AAACTCTTTA GTGATTTTTC CGATGCCCGC
GGTATTCCGG TATTGCTGCC AATCTTAGAT CTTGATGAGT TGATGGGGAT TAACCCTAAC
GATATCAAAG GTATGTTTGC CGATATCGTG GCGAGTGTCT CTGGCCGTTA TCAAGCTGAC
TTTTTGGCAT TGGTGGCGAT TGATGCCGCT GGCAGCCAAG TTCGTTACCG TTTAAATCTC
TATACTAAGG CCACCATTGA CTCTTTGACG CCACCGTTAT TCAGTTACAA CGGCACCGCT
GAAAATTCGA CTCAGGCGAT TGAAGCCATG ATGGCGGCGT TAGGTGAATA CTATTTTACT
AAGTATGCCA TTGCTGATAC TGGTACACAG CAAGGCGCGA GTGTCACTTT TGTGAATATT
CAAAAAATGG CGCAATTAGT TGAAGTTGAA AAATATTTGA AACAACTTAG CGCGATTAAA
AATGCCACGT TAACGCATAT TCAAGGTCAT ACCGTGACCT TCTCGCTAGA TTTGTTTGGC
TCAGAAACGG ATTTACAACG TTTATTAAGC TTAGAGCCGC GAATTTCTGT GGTAGCACCT
GTGAGTGCGG GGGAATTTAG TCCAGTCTCT AACCAAACAG GCAAGCCTGT GTATGAATGG
CGTTTACCTT AA
 
Protein sequence
MLKFLLKPSL IAFLYCLFTI NSVNAVEVSK LDEANVPVSS RAVAERDKAL KSALEQVIIK 
NTGTARSLDN SLIQSQLSNP DTLLSQYGYI EQNGQLLLTA SFEHRRIVAL LRQAQLPVWG
TQRPLTLFWV AMPGDGDTMI LGDSSALAER KLFSDFSDAR GIPVLLPILD LDELMGINPN
DIKGMFADIV ASVSGRYQAD FLALVAIDAA GSQVRYRLNL YTKATIDSLT PPLFSYNGTA
ENSTQAIEAM MAALGEYYFT KYAIADTGTQ QGASVTFVNI QKMAQLVEVE KYLKQLSAIK
NATLTHIQGH TVTFSLDLFG SETDLQRLLS LEPRISVVAP VSAGEFSPVS NQTGKPVYEW
RLP