Gene Shew185_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1763 
Symbol 
ID5372484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2123078 
End bp2123716 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID640829966 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001365969 
Protein GI153000288 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0024682 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATC TGAGTGATAT CCGCCGCGAG TATGCTAAAG GCGGCTTAAG ACGTGCCGAC 
TTACCGCAAA ACCCGATGGA CTTGTTTGAA TTGTGGATGA CGCAGGCGAG GGATGCTGAG 
CTTAGCGATC CAACCGCCAT GTGTGTGGCA ACGGTAGATG AACACGGCCA ACCTTTTCAA 
CGAATAGTGT TACTTAAGCG TTTTGATGAC ACTGGCTTCG TGTTTTTTAC CAACTTAGGC 
AGCCGCAAAG CCCAGCAAAT TGCCGCCAAT AATAAAGTCA GTTTGCATTT CCCTTGGCAT 
CCTTTAGAGC GCCAAGTATC GGTGCTCGGA GAAGCGCAGG CGCTGTCTAC CGCCGAAGTG 
CTTAAATACT TTATGACCCG TCCTAAGGAC AGTCAAATTG CCGCTTGGGT GTCGCAGCAG 
TCGAGTAAAC TCAGCGCGAG ACAAGTACTT GAAGGTAAAT TCTTCGAAAT GAAGGCTAAG 
TTCGCCAAGG GCGATGTGCC TTTACCCAGT TTTTGGGGCG GTTACTTAGT CAGACCTTCG 
AGTATCGAAT TTTGGCAGGG TGGAGAACAC AGGCTGCATG ATCGTTTTAT TTATACTCGC 
CATGATGCTG AGTGGGAAAT CGATCGTTTA GCGCCATAA
 
Protein sequence
MTDLSDIRRE YAKGGLRRAD LPQNPMDLFE LWMTQARDAE LSDPTAMCVA TVDEHGQPFQ 
RIVLLKRFDD TGFVFFTNLG SRKAQQIAAN NKVSLHFPWH PLERQVSVLG EAQALSTAEV 
LKYFMTRPKD SQIAAWVSQQ SSKLSARQVL EGKFFEMKAK FAKGDVPLPS FWGGYLVRPS 
SIEFWQGGEH RLHDRFIYTR HDAEWEIDRL AP