| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1761 |
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| Symbol | |
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| ID | 5371239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2120031 |
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| End bp | 2121944 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829964 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001365967 |
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| Protein GI | 153000286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0168893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATT GGTCTATTGA TGATGCTCGT GCTGGGTACA ATGTTACTCA CTGGAGCCAA
GGTTTTTATG GGATCAGCGA TCACGGTGAG GTGACAGTGT CACCGGATCC AAAAAATCCT
GATTACAAGA TTGGCTTAAA TGAGCTAGCC AAAGACATGG TTAAAGCGGG CGTCGCTTTA
CCTGTACTAG TTCGTTTTCC GCAGATCCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAGAA GTACGAGTAT CAGGCGGACT ATTTGCTGGT TTACCCAATT
AAAGTAAACC AACAGCAAAC TGTGGTGGAA GAGATCCTGG CGAGTCAGGC ATCAAAAGAA
GTACCACAAC TGGGTTTAGA AGCAGGCAGT AAGCCCGAGC TGATGGCTGT GTTAGCCATG
GCGCAAAAAG CCAGTTCAGT CATTGTGTGT AATGGTTATA AAGATAATGA ATATATCCGT
TTAGCATTGA TTGGTGAAAA GTTAGGCCAC AAGGTTTACA TCGTTTTAGA AAAACTGTCT
GAACTGAAAA TGGTGTTAGC GGAATCTAAA CGTCTTGGTG TGACACCGCG TTTAGGTCTG
CGTGCGCGTT TAGCGTTCCA AGGCAAAGGC AAATGGCAGG CGAGCGGCGG CGAGAAGTCT
AAGTTCGGTC TATCTGCTGC GCAAATTTTG CTGGTTGTTG AACAACTTAA GCAAAACGAT
ATGCTGGATT CGCTGCAATT GCTGCATTTC CACTTAGGTT CGCAAATCGC TAACATTCGT
GATATTCGCC AAGGTGTGAG TGAAGCGGGT CGTTTCTATT GTGAATTACG TGCATTAGGC
GCAAGCGTTA ACTGCTTCGA CGTCGGTGGT GGTTTAGCGG TGGATTACGA TGGCACACGT
AGCCAAAGTA ATAACTCGAT GAACTACGGC CTGACCGAAT ACGCCAACAA TATCGTTAAC
GTATTGACCG ACATCTGTAA TGAATACGAG CAGCCTATGC CACGTATTAT TTCAGAGTCT
GGCCGTTACT TAACCGCGCA TCACGCTGTG CTTATCACCG ATGTTATCGG TACTGAAGCT
TATCAGCCTG AAGATATTCA ACCGCCTGCG GAAGAGTCAC CACAATTATT GCATAACATG
TGGCATTCAT GGTCTGAGCT TAGCGGTCGC GCCGATCAAC GTGCTTTGAT TGAGATTTAT
CACGATAGCC AAAGTGACTT ACAAGAAGCG CATTCGCTAT TTGCTCTTGG TCAATTGAGC
TTGGCAGAAC GTGCGTGGGC TGAACAAGCT AACCTGCGTG TTTGCCATGA AGTGCAAGGA
CTATTGAGTG CGAAGAACCG TTATCACAGA CCGATCATTG ATGAACTCAA TGAAAAGTTA
GCTGATAAGT TCTTTGTTAA CTTCTCATTA TTCCAGTCAT TACCGGATGC TTGGGGTATT
GACCAAGTGT TCCCAGTATT GCCGTTATCG GGTTTAGATA AAGCCCCTGA GCGCCGTGCT
GTCATGCTCG ATATTACCTG TGACTCTGAC GGTATTGTCG ATCAATACGT TGATGGTCAA
GGGATTGAAA CCACATTGCC AGTACCAGCC TGGAGTGCGG ATAGCCCGTA CCTGATTGGT
TTCTTCCTTG TGGGCGCATA CCAAGAAATC TTGGGTGATA TGCATAACCT GTTTGGTGAT
ACTAACTCTG CGGTTGTTCG CATCGAAGAT AACGGTGTGA CTAACATTGA ATCGGTATTG
GCGGGTGATA CTGTCGCTGA CGTATTGCGT TATGTTAACT TAGATGCGGT GGCCTTTATG
CGCACTTACG AAGAGTTAGT GAATCTGCAT ATTGCCGAAG ATGAACGCGC ACAAATTTTA
GAAGAGCTGC AAGTTGGCCT GAAAGGCTAC ACTTACTTAG AAGATTTTTC TTAA
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| Protein sequence | MNDWSIDDAR AGYNVTHWSQ GFYGISDHGE VTVSPDPKNP DYKIGLNELA KDMVKAGVAL
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQQTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVTPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL LVVEQLKQND
MLDSLQLLHF HLGSQIANIR DIRQGVSEAG RFYCELRALG ASVNCFDVGG GLAVDYDGTR
SQSNNSMNYG LTEYANNIVN VLTDICNEYE QPMPRIISES GRYLTAHHAV LITDVIGTEA
YQPEDIQPPA EESPQLLHNM WHSWSELSGR ADQRALIEIY HDSQSDLQEA HSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSAKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSADSPYLIG
FFLVGAYQEI LGDMHNLFGD TNSAVVRIED NGVTNIESVL AGDTVADVLR YVNLDAVAFM
RTYEELVNLH IAEDERAQIL EELQVGLKGY TYLEDFS
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