Gene Shew185_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1758 
Symbol 
ID5372338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2117027 
End bp2117698 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content50% 
IMG OID640829961 
Producthypothetical protein 
Protein accessionYP_001365964 
Protein GI153000283 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA CGTTACACGA AGCCAGAGTC ATCGGATGCC TGCTTGAGAA AGAAATCACC 
ACCCCTGAGC AATATCCACT CTCGCTAAAC TCTTTGACCT TAGCCTGCAA TCAAAAAACC
AGCCGCGAGC CGGTACTCGA ACTTAGCGAA ACCCAAGTGC AAATCGCCGT CGATTCCCTT
AATCGGAAAC GTTTGATCAG CGAACAGTCG GGATTTGGCA GCCGCGTCGT TAAATACAAG
CACAGATTCT GCAATACCGA ATTCAGTGAA CTTCAACTGT CCGCCGCCGC ACTCGCCATC
GTCTGTTTGT TGCTATTACG TGGCCCACAA ACGCCGGGAG AATTGCGAAC TCGCAGTAAT
CGCCTACACG AGTTTAAAGA CGTGATCGAA GTGGAAGATT GCATCCGCCA ATTGATGAAC
CGCGAAAAGC CTTTCTTAAA ACAATTGCCC AGAGAAGCCG GCCGCCGCGA ATCTCGTTAT
GTGGAATTAT TCTCTGCCGC CTCATCGCAA CTCGAAACTG CGCAGCCCGA AAGTGCGAGC
CATACCGTCG CCCATGTCGC TGTGTCTTTG GATGCTGAGC CGCTTGAATT GACTAAAAGA
GTGACCGAGC TTGAGCAACA AGTGGCTGAA CTGACGCAAA AGCTTGATGA GTTAATTGCC
TCGTTAAGCT AA
 
Protein sequence
MELTLHEARV IGCLLEKEIT TPEQYPLSLN SLTLACNQKT SREPVLELSE TQVQIAVDSL 
NRKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSAAALAI VCLLLLRGPQ TPGELRTRSN
RLHEFKDVIE VEDCIRQLMN REKPFLKQLP REAGRRESRY VELFSAASSQ LETAQPESAS
HTVAHVAVSL DAEPLELTKR VTELEQQVAE LTQKLDELIA SLS